Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meriones_20unguiculatus_20[refseq_20GCF_5F002204375.1_202017-06-21] 68,793 sequences; 2,523,124,066 total letters Query= NC_004828.1 Length=4694 Score E Sequences producing significant alignments: (Bits) Value seq2096 100 8e-18 >seq2096 Length=284554 Score = 100 bits (110), Expect = 8e-18 Identities = 119/160 (74%), Gaps = 1/160 (1%) Strand=Plus/Plus Query 1247 ATGCGACCACCGGCAAGACCAACATCGCGGAGGCTATTGCCCATGCTGTGCCGTTCTATG 1306 |||| |||||| ||||| ||||||| || ||||||||||| |||||| || ||||||| Sbjct 256229 ATGCCACCACCAGCAAGGCCAACATTGCCAAGGCTATTGCCTATGCTG-ACCCTTCTATG 256287 Query 1307 GATGCGTTAACTGGACCAACGAGAACTTTCCGTTCAACGACTGCGTCGAAAAAATGATTA 1366 || || ||||||| |||| ||||||| |||| | ||| || || || |||| || Sbjct 256288 ACCATGTCAAGTGGACCAGCGAGGACTTTCCCTTCACCATCTGAGTGGACAAGATGACTA 256347 Query 1367 TCTGGTGGGAGGAGGGCAAAATGACCGCCAAAGTGGTGGA 1406 ||||| ||| || | || || | |||| ||||| || Sbjct 256348 TCTGGCAGGAAGAAGAAAAGATTGCATCCAAGGTGGTAGA 256387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14897582269455