Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meriones_20unguiculatus_20[refseq_20GCF_5F002204375.1_202017-06-21] 68,793 sequences; 2,523,124,066 total letters Query= NC_006147.2 Length=5132 Score E Sequences producing significant alignments: (Bits) Value seq2096 84.2 7e-13 >seq2096 Length=284554 Score = 84.2 bits (92), Expect = 7e-13 Identities = 104/141 (74%), Gaps = 1/141 (1%) Strand=Plus/Plus Query 1558 TGCGACCACCGGAAAGACCAACATAGCCGAGGCTATTGCCCATGCTGTACCCTTCTATGG 1617 ||| |||||| | ||| ||||||| ||| ||||||||||| |||||| ||||||||||| Sbjct 256230 TGCCACCACCAGCAAGGCCAACATTGCCAAGGCTATTGCCTATGCTG-ACCCTTCTATGA 256288 Query 1618 CTGTGTTAACTGGACTAATGAGAACTTCCCATTTAATGACTGCGTTGATAAAATGCTTAT 1677 | ||| || ||||| | ||| |||| || || | ||| || || || ||| ||| Sbjct 256289 CCATGTCAAGTGGACCAGCGAGGACTTTCCCTTCACCATCTGAGTGGACAAGATGACTAT 256348 Query 1678 ATGGTGGGAGGAGGGAAAAAT 1698 ||| ||| || | ||| || Sbjct 256349 CTGGCAGGAAGAAGAAAAGAT 256369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16298127672765