Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meriones_20unguiculatus_20[refseq_20GCF_5F002204375.1_202017-06-21] 68,793 sequences; 2,523,124,066 total letters Query= NC_014468.1 Length=4286 Score E Sequences producing significant alignments: (Bits) Value seq2096 102 2e-18 >seq2096 Length=284554 Score = 102 bits (112), Expect = 2e-18 Identities = 130/175 (74%), Gaps = 3/175 (2%) Strand=Plus/Plus Query 1184 GCCACGACCGGCAAGACGAACCTCGCCGAGGCCATCAGCCACTCGGTG-CCCTTCTACGG 1242 ||||| ||| ||||| | ||| | ||| |||| || ||| | | || |||||||| | Sbjct 256231 GCCACCACCAGCAAGGCCAACATTGCCAAGGCTATT-GCCTAT-GCTGACCCTTCTATGA 256288 Query 1243 CTGCGTCAACTGGACCAACGAGAACTTCCCCTTCAACGACTGCGTGGACAAGATGATCAT 1302 | ||||| ||||||| |||| |||| ||||||| | ||| ||||||||||||| || Sbjct 256289 CCATGTCAAGTGGACCAGCGAGGACTTTCCCTTCACCATCTGAGTGGACAAGATGACTAT 256348 Query 1303 CTGGTGGGAGGAGGGCAAGATGACGTCCAAGGTCGTCGAGAGCGCCAAGGCCATC 1357 |||| ||| || | ||||| | |||||||| || ||| | ||||| ||||| Sbjct 256349 CTGGCAGGAAGAAGAAAAGATTGCATCCAAGGTGGTAGAGTACTCCAAGACCATC 256403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 13592964633495