Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20spretus_20[genbank_20GCA_5F001624865.1_202016-04-26] 5,404 sequences; 2,625,587,472 total letters Query= NC_004284.1 Length=5908 Score E Sequences producing significant alignments: (Bits) Value seq7 93.3 2e-15 >seq7 Length=104786220 Score = 93.3 bits (102), Expect = 2e-15 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 1084 TAACTGTTCCCGGATATAAATATCTTGGTCCTGGAAATTCACTTAACAGAGGTCAACCTA 1143 |||| |||| ||||||||||| |||||||| |||||||||||| || |||| |||| | Sbjct 92708706 TAACACTTCCTGGATATAAATACCTTGGTCCGGGAAATTCACTTGACCAAGGTGAACCAA 92708647 Query 1144 CTAATCAAATAGACGAAGACGCTAAGGAACACGACGAAGCATACGA 1189 |||||| ||||| | ||||| |||||||| ||||| || || Sbjct 92708646 CTAATCCTTCAGACGCTGCAGCTAAAGAACACGATGAAGCTTATGA 92708601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 18792489180780