Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20spretus_20[genbank_20GCA_5F001624865.1_202016-04-26] 5,404 sequences; 2,625,587,472 total letters Query= NC_004286.1 Length=6039 Score E Sequences producing significant alignments: (Bits) Value seq7 91.5 6e-15 >seq7 Length=104786220 Score = 91.5 bits (100), Expect = 6e-15 Identities = 86/107 (80%), Gaps = 2/107 (2%) Strand=Plus/Plus Query 4831 TCATAAGCTTCGTCGTGTTCTTTAGCGTCTTCGTCTATTTGATTTATAGGTTGACCTCTA 4890 ||||||||||| |||||||||||||| | ||||| |||| | |||| |||| | Sbjct 92708601 TCATAAGCTTCATCGTGTTCTTTAGCTGCAGCGTCTGAAGGATTAGTTGGTTCACCT-TG 92708659 Query 4891 TTCAA-TGAATTTCCAGGACCAAGATATTTATATCCAGGAACAGTTA 4936 |||| ||||||||| |||||||| |||||||||||||||| |||| Sbjct 92708660 GTCAAGTGAATTTCCCGGACCAAGGTATTTATATCCAGGAAGTGTTA 92708706 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19208432152368