Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20spretus_20[genbank_20GCA_5F001624865.1_202016-04-26] 5,404 sequences; 2,625,587,472 total letters Query= NC_005341.1 Length=6034 Score E Sequences producing significant alignments: (Bits) Value seq7 96.9 1e-16 >seq7 Length=104786220 Score = 96.9 bits (106), Expect = 1e-16 Identities = 85/106 (80%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 4829 TCGTAAGCTTCGTCGTGTTCTTTAGCGTCTTCGTCTATTTGATTAGTAGGTTGACCTCTA 4888 || |||||||| |||||||||||||| | ||||| ||||||| |||| |||| Sbjct 92708601 TCATAAGCTTCATCGTGTTCTTTAGCTGCAGCGTCTGAAGGATTAGTTGGTTCACCTTGG 92708660 Query 4889 TTAAGTGAGTTTCCAGGACCAAGATATTTATATCCAGGAACAGTTA 4934 | |||||| ||||| |||||||| |||||||||||||||| |||| Sbjct 92708661 TCAAGTGAATTTCCCGGACCAAGGTATTTATATCCAGGAAGTGTTA 92708706 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19192433125088