Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20spretus_20[genbank_20GCA_5F001624865.1_202016-04-26] 5,404 sequences; 2,625,587,472 total letters Query= NC_012729.2 Length=5104 Score E Sequences producing significant alignments: (Bits) Value seq7 78.8 3e-11 >seq7 Length=104786220 Score = 78.8 bits (86), Expect = 3e-11 Identities = 118/166 (71%), Gaps = 4/166 (2%) Strand=Plus/Minus Query 2980 CTTCCTGGTTATAAATACCTTGGTCCATTTAATCCTCTTGAAAACGGTGAACCAGTTAAT 3039 |||||||| ||||||||||||||||| ||| | ||||| | ||||||||| |||| Sbjct 92708701 CTTCCTGGATATAAATACCTTGGTCCGGGAAATTCACTTGACCAAGGTGAACCAACTAAT 92708642 Query 3040 AAAGCTGATCGTGCTGCTCAAGCTCATGATAAATCATATTCTGAACTAATAAAAAGTGGA 3099 | || ||| ||| ||| || ||| || | ||| || || ||| |||| Sbjct 92708641 CCTTCAGACGCTGCAGCTAAAGAACACGATGAAGCTTATGACCAATACATCAAATCTGGA 92708582 Query 3100 AAAAATCCTTACTTATA--TTTCAATAAAGCTGATGAAAAATTCAT 3143 |||||||||||| |||| ||||| || || ||||||||||| Sbjct 92708581 AAAAATCCTTACCTATACTTTTCAGCT--GCAGACGAAAAATTCAT 92708538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16219841249340