Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20spretus_20[genbank_20GCA_5F001624865.1_202016-04-26] 5,404 sequences; 2,625,587,472 total letters Query= NC_020904.1 Length=2063 Score E Sequences producing significant alignments: (Bits) Value seq15 82.4 1e-12 >seq15 Length=152823684 Score = 82.4 bits (90), Expect = 1e-12 Identities = 90/113 (80%), Gaps = 9/113 (8%) Strand=Plus/Plus Query 948 GGGGGCTGGGGGCCCCGCCGTGCGAGGGGAGGCGGTGCGTTGACCGAAGCGCGGCCGGGG 1007 ||||||||||| |||| || |||||||||| | |||| | ||||||| ||||||||| Sbjct 146412782 GGGGGCTGGGG-CCCCACCATGCGAGGGGACTCTGTGCCA-GCCCGAAGCACGGCCGGGG 146412839 Query 1008 G-CCGCGCGAGGGCGTTTACC-TG-TTCACCCCCCTTCGAGGCTGTTTATTAA 1057 | ||| ||||||| ||| || ||||||||||||| ||| |||||| ||| Sbjct 146412840 GGCCGTGCGAGGG----TACTGTGATTCACCCCCCTTCAAGGATGTTTAGTAA 146412888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6492427199656