Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20spretus_20[genbank_20GCA_5F001624865.1_202016-04-26] 5,404 sequences; 2,625,587,472 total letters Query= NC_028045.1 Length=1767 Score E Sequences producing significant alignments: (Bits) Value seq15 80.6 3e-12 >seq15 Length=152823684 Score = 80.6 bits (88), Expect = 3e-12 Identities = 59/68 (87%), Gaps = 2/68 (3%) Strand=Plus/Minus Query 986 CAGATACTACACTTGATCTTAGCCAAAAGGCCGAGGAGTGATCTAAACCACCTTTTCAAA 1045 ||||||||||||||||||||||||||||||||||| || ||||| ||||| |||| ||| Sbjct 123287347 CAGATACTACACTTGATCTTAGCCAAAAGGCCGAGAAGCGATCT--ACCACTTTTTTAAA 123287290 Query 1046 TTACAAAA 1053 | || || Sbjct 123287289 ATTCAGAA 123287282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5545281585512