Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neotoma_20lepida_20[genbank_20GCA_5F001675575.1_202016-06-23]
119,373 sequences; 2,353,855,022 total letters
Query= NC_006263.1
Length=4682
Score E
Sequences producing significant alignments: (Bits) Value
seq75233 102 2e-18
>seq75233
Length=6300
Score = 102 bits (112), Expect = 2e-18
Identities = 138/191 (72%), Gaps = 1/191 (1%)
Strand=Plus/Plus
Query 1243 GGACCTGCGACCACCGGCAAGACCAACATCGCGGAGGCTATTGCCCATGCTGTGCCGTTC 1302
|||||||| |||||| ||||||| |||| || ||||||||||||||| | || | |
Sbjct 2060 GGACCTGCCACCACCAGCAAGACTGACATTGCCAAGGCTATTGCCCATGTAGACCCCT-C 2118
Query 1303 TATGGATGCGTTAACTGGACCAACGAGAACTTTCCGTTCAACGACTGCGTCGAAAAGATG 1362
| ||| || | |||| ||| | || ||||||| ||||| || || || ||||||
Sbjct 2119 TGTGGCCAGGTCACCTGGGCCAGCAAGGACTTTCCCTTCAATAGTTGAGTGGACAAGATG 2178
Query 1363 ATTATCTGGTGGGAAGAGGGCAAAATGACCGCCAAGGTGGTGGAAACGGCTAAAGCGATT 1422
| | | || |||||| || || || || || |||||||||| | | || || ||
Sbjct 2179 ACTCTTTGACAGGAAGAAGGAAAGATTACATCCCAGGTGGTGGAGTTGTCCAAGGCCATC 2238
Query 1423 CTGGGAGGATC 1433
|||||||||||
Sbjct 2239 CTGGGAGGATC 2249
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 14850984578415
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |