Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctolagus_20cuniculus_20[refseq_20GCF_5F000003625.3_202009-10-20] 3,241 sequences; 2,737,462,810 total letters Query= NC_006148.1 Length=4432 Score E Sequences producing significant alignments: (Bits) Value seq10 102 2e-18 >seq10 Length=47997241 Score = 102 bits (112), Expect = 2e-18 Identities = 95/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 2847 ACTTCAATCGATTCCATTGCCACTTCTCCCCCCGAGACTGGCAAAGACTCATCAACAACC 2906 |||| || | ||||| ||||||| | || ||||||||||||||||||||||||||||| Sbjct 8293335 ACTTGAACAGGTTCCACTGCCACTGCAGCCTCCGAGACTGGCAAAGACTCATCAACAACC 8293276 Query 2907 ACACAGGCATCAGGCCGAAAGGACTCAAAATCAAAGTCTTTAACGTCCAAGTCAAAGAAG 2966 || || || | || || |||||| ||| ||||||||| | ||||||||||||| Sbjct 8293275 ACTGGGGAGTCTGTCCCAAGACTCTCAAAGTCAGAGTCTTTAATATACAAGTCAAAGAAG 8293216 Query 2967 T 2967 | Sbjct 8293215 T 8293215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14069901226305