Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Psammomys_20obesus_20[genbank_20GCA_5F002215935.1_202017-07-07] 96,427 sequences; 2,311,471,749 total letters Query= NC_014468.1 Length=4286 Score E Sequences producing significant alignments: (Bits) Value SEQ18114 93.3 1e-15 >SEQ18114 Length=11168 Score = 93.3 bits (102), Expect = 1e-15 Identities = 128/175 (73%), Gaps = 3/175 (2%) Strand=Plus/Minus Query 1184 GCCACGACCGGCAAGACGAACCTCGCCGAGGCCATCAGCCACTCGGTG-CCCTTCTACGG 1242 ||||| ||| ||||| | ||| | ||| |||| || ||| | | || ||||||| | Sbjct 1795 GCCACCACCAGCAAGGCCAACATTGCCAAGGCTATT-GCCTAT-GCTGACCCTTCTGTGA 1738 Query 1243 CTGCGTCAACTGGACCAACGAGAACTTCCCCTTCAACGACTGCGTGGACAAGATGATCAT 1302 | ||||| ||||||| |||| |||| ||||||| | ||| ||||||||||||| || Sbjct 1737 CCATGTCAAGTGGACCAGCGAGGACTTTCCCTTCACCAGCTGAGTGGACAAGATGACTAT 1678 Query 1303 CTGGTGGGAGGAGGGCAAGATGACGTCCAAGGTCGTCGAGAGCGCCAAGGCCATC 1357 |||| ||| || | ||||| | |||||||| || || | ||||| ||||| Sbjct 1677 CTGGCAGGAAGAAGAAAAGATTGCATCCAAGGTGGTAGAATACTCCAAGACCATC 1623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 13588853108805