Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acinonyx_20jubatus_20[refseq_20GCF_5F001443585.1_202015-11-13] 14,383 sequences; 2,372,553,907 total letters Query= NC_024890.1 Length=2169 Score E Sequences producing significant alignments: (Bits) Value seq3437 78.8 1e-11 >seq3437 Length=1930 Score = 78.8 bits (86), Expect = 1e-11 Identities = 109/147 (74%), Gaps = 12/147 (8%) Strand=Plus/Minus Query 1 TATAAAAAGAAATGGGGTGACGAATGGCTGAGTTTTCTGCTGCTGGATGGCCAAGA---- 56 |||| || |||||||||||||||||||||||||| |||| | |||| ||| ||| Sbjct 1686 TATATAACTAAATGGGGTGACGAATGGCTGAGTTTACTGC-GTTGGACGGCGGAGACCGG 1628 Query 57 -GAGCTCAT-GTAAGTAGAGAGAGCGCTCTTGGAGCCGGGGCGGGTGCAGGAGGCCTA-- 112 || | ||| || || | | ||||| |||| | |||||||||| |||||||| Sbjct 1627 CGACCGCATGGTGAG-CGGGGCTGCGCTACGGGAGGCTGGGCGGGTGC-CGAGGCCTACT 1570 Query 113 -GAGCCGGATCAAGGGGCTTATCGGGC 138 |||| |||||||||||||||||| Sbjct 1569 TAGGCCGAGTCAAGGGGCTTATCGGGC 1543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6830955938030