Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acinonyx_20jubatus_20[refseq_20GCF_5F001443585.1_202015-11-13] 14,383 sequences; 2,372,553,907 total letters Query= NC_024908.1 Length=2367 Score E Sequences producing significant alignments: (Bits) Value seq2311 84.2 3e-13 seq2032 84.2 3e-13 seq2384 80.6 4e-12 >seq2311 Length=2054 Score = 84.2 bits (92), Expect = 3e-13 Identities = 82/101 (81%), Gaps = 6/101 (6%) Strand=Plus/Plus Query 2251 CGGTCGGAAGAGAGCGGAGCTCTCGCTCTGACGGCGTGGGCGGGTGCCGGAGGCCAAGCG 2310 ||||| ||||||| || || ||||||||||| |||||||||||| |||||| ||| Sbjct 218 CGGTCAGAAGAGACCGAAGGGAACGCTCTGACGGTCTGGGCGGGTGCC-GAGGCC-TGCG 275 Query 2311 GAGCTTAGGCCGGAGTCAAGGGGCCTATCGGGCGCGCCGAG 2351 ||| |||| |||||||||||||||||||||| ||||| Sbjct 276 CAGC---GGCC-GAGTCAAGGGGCCTATCGGGCGGACCGAG 312 >seq2032 Length=2005 Score = 84.2 bits (92), Expect = 3e-13 Identities = 82/101 (81%), Gaps = 6/101 (6%) Strand=Plus/Minus Query 2251 CGGTCGGAAGAGAGCGGAGCTCTCGCTCTGACGGCGTGGGCGGGTGCCGGAGGCCAAGCG 2310 ||||| ||||||| || || ||||||||||| |||||||||||| |||||| ||| Sbjct 1738 CGGTCAGAAGAGAACGCAGTGAACGCTCTGACGGTCTGGGCGGGTGCC-GAGGCC-TGCG 1681 Query 2311 GAGCTTAGGCCGGAGTCAAGGGGCCTATCGGGCGCGCCGAG 2351 ||| |||| |||||||||||||||||||||| ||||| Sbjct 1680 AAGC---GGCC-GAGTCAAGGGGCCTATCGGGCGGACCGAG 1644 >seq2384 Length=2016 Score = 80.6 bits (88), Expect = 4e-12 Identities = 81/101 (80%), Gaps = 6/101 (6%) Strand=Plus/Minus Query 2251 CGGTCGGAAGAGAGCGGAGCTCTCGCTCTGACGGCGTGGGCGGGTGCCGGAGGCCAAGCG 2310 ||||| ||||||| ||||| | |||||||| ||||||||||||| ||||| ||| Sbjct 1746 CGGTCAGAAGAGACCGGAGGGAACATTCTGACGGTCTGGGCGGGTGCCG-AGGCCT-GCG 1689 Query 2311 GAGCTTAGGCCGGAGTCAAGGGGCCTATCGGGCGCGCCGAG 2351 ||| ||||| ||||||||||||||||||||| ||||| Sbjct 1688 AAGC---GGCCG-AGTCAAGGGGCCTATCGGGCGGACCGAG 1652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7464459111674