Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_001701.1
Length=5106
Score E
Sequences producing significant alignments: (Bits) Value
seq401307 322 2e-84
seq365748 80.6 9e-12
>seq401307
Length=51916
Score = 322 bits (356), Expect = 2e-84
Identities = 459/640 (72%), Gaps = 7/640 (1%)
Strand=Plus/Plus
Query 1335 GCTGCACTGGAAAATGCCCGTGCTGAAATGTTATTGACAAAGACTGCAACTGATTACCTG 1394
|| |||||||| || || || || |||||| | |||| ||| | || || ||||||
Sbjct 13872 GCAGCACTGGAGAACGCGCGAGCCGAAATGCTCCTGACGAAGTCGGCCGAAGACTACCTG 13931
Query 1395 ATAGGAAAAGACCCTGTCCTGGATATAACTAAGAATAGGGTCTATCAAATTCTGAAAATG 1454
|||| || || ||| ||| | || ||||| | ||| | ||| | | | ||
Sbjct 13932 CTAGGCAAGCTTCCAGTCGGGGACACCACCAAGAACAAGGTGTTCCAACGTTTCCAGGTG 13991
Query 1455 AATAACTACAACCCTCAATACATAGGAAGTATCCT-GTGCGGCTGGGTGAAGAGAGAGTT 1513
||| ||| |||| | || | ||||| || || ||||| | | |||||
Sbjct 13992 AATCGGTACGACCCCGTCTTGGCAGCGAACATCCTAGTTCG-CTGGGCCCGGTGGGAGTT 14050
Query 1514 CAACAAAAGAAACGCCATATGGCTCTACGGACCTGCCACCACCGGGAAGACCAACATTGC 1573
|||||| | |||||||| ||| ||||| ||||||| |||||| | ||||| | ||| |
Sbjct 14051 CAACAAGGGCAACGCCATCTGGTTCTACAGACCTGCGACCACCAGCAAGACAAGCATCGT 14110
Query 1574 AGAAGCTATTGCCCATGCTGTACCCTTCTATGGCTGTGTTAACTGGACTAATGAGAACTT 1633
|| ||||| |||| |||||| || || |||||||||| ||||||||||||||||||||
Sbjct 14111 GGAGGCTATCGCCCGTGCTGTGCCATTTTATGGCTGTGGAAACTGGACTAATGAGAACTT 14170
Query 1634 TCCTTTTAATGATTGTGTTGATAAAATGCTGATTTGGTGGGAGGAGGGAAAAATGACTAA 1693
||||| ||||| || | ||| | ||| |||||||||||||||| ||||| |||||||
Sbjct 14171 GCCTTTCAATGACTGGGCAGATTAGATGGTGATTTGGTGGGAGGAAGGAAAGATGACTAG 14230
Query 1694 TAAGGTTGTTGAATCTGCAAAAGCAATTTTGGGAGGGTCTGCTGT-CCGGGTAGACCAGA 1752
||| |||| || ||||| ||||| ||||||| |||| ||||| | |||| || || |
Sbjct 14231 TAAAATTGTAGAGTCTGCTAAAGCCATTTTGGTTGGGTTGGCTGTGCGGGGTTGATCAAA 14290
Query 1753 AATGTAAAGGATCTGTTTGTATTGAACCTACTCCTGTAATTATTACTAGTAATACTGATA 1812
|||||||||| || || |||||||| || |||||| ||||||| |||||||| |||
Sbjct 14291 AATGTAAAGGTTCCGTGCAAATTGAACCAACGCCTGTACTTATTACCAGTAATACATATA 14350
Query 1813 TGTGTATGATTGTTGATGGCAACTCTACTACAATGGAACATAGAATACCATTAGAGGAGC 1872
|||| | |||||||| ||| ||||| ||||||||| ||| || |||||
Sbjct 14351 AGTGTGCTGTGGTTGATGGGAACAGCACTACCTTGGAACATAAGGGACCTTTGGAGGAAA 14410
Query 1873 GTATGTTTCAAATTGTCCTATCACA--TAAATTGGAGCCTTCTTTTGGAAAAATTTCTAA 1930
| ||||| | || | ||||| ||| | || | |||||| ||||| |||
Sbjct 14411 GAATGTTCC--TTTTTAGGTTCACAGTAAAACTCAGGCATGATTTTGGGAAAATAAGTAA 14468
Query 1931 AAAAGAAGTCAGAGAATTTTTCAAATGGGCCAATGACAAT 1970
| || || |||||||||||| | |||| | ||||||||
Sbjct 14469 ATGGGAGGTAAGAGAATTTTTCCAGTGGGGCCATGACAAT 14508
>seq365748
Length=20703
Score = 80.6 bits (88), Expect = 9e-12
Identities = 98/131 (75%), Gaps = 7/131 (5%)
Strand=Plus/Minus
Query 1602 TATGGCTGTGTTAACTGGACTAATGAGAACTTTCCTTTTAATGATTGTGTTGATAAAATG 1661
|||| |||||||| ||||| ||||| |||||||| || |||||| ||| |||||||
Sbjct 7588 TATGTTTGTGTTAAATGGACCAATGAAAACTTTCCATTCAATGATGATGTCGATAAAAAT 7529
Query 1662 CTGATTTGGTGGGAGGAGGGAAAA---ATGACTAATAAGGTTGTTGAATCTGCAAAAGCA 1718
| |||||||||||| | |||| ||||| || | | |||| |||||||||||
Sbjct 7528 -TAATTTGGTGGGAGAAAAAAAAATTCATGACAAAAA---TAACTGAAACTGCAAAAGCA 7473
Query 1719 ATTTTGGGAGG 1729
|| | |||||
Sbjct 7472 GTTCTAGGAGG 7462
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 16152400011660
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |