Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_001829.1
Length=4767
Score E
Sequences producing significant alignments: (Bits) Value
seq401307 123 8e-25
>seq401307
Length=51916
Score = 123 bits (136), Expect = 8e-25
Identities = 136/181 (75%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 1339 AGTTCGGGAAGAGGAACACCATCTGGCTCTTTGGGCCGGCCACGACGGGTAAAACCAACA 1398
||||| ||| | ||| |||||||| ||| | || || || || | || || | ||
Sbjct 14047 AGTTCAACAAGGGCAACGCCATCTGGTTCTACAGACCTGCGACCACCAGCAAGACAAGCA 14106
Query 1399 TCGCGGAAGCCATCGCCCACGCCGTGCCCTTCTACGGCTGCGTGAACTGGACCAATGAGA 1458
||| ||| || ||||||| || ||||| || || ||||| | |||||||| |||||||
Sbjct 14107 TCGTGGAGGCTATCGCCCGTGCTGTGCCATTTTATGGCTGTGGAAACTGGACTAATGAGA 14166
Query 1459 ACTTTCCGTTCAACGATTGCGTCGACAAGATGGTGATCTGGTGGGAGGAGGGCAAGATGA 1518
|||| || ||||| || || | || |||||||||| ||||||||||| || |||||||
Sbjct 14167 ACTTGCCTTTCAATGACTGGGCAGATTAGATGGTGATTTGGTGGGAGGAAGGAAAGATGA 14226
Query 1519 C 1519
|
Sbjct 14227 C 14227
Score = 77.0 bits (84), Expect = 1e-10
Identities = 187/279 (67%), Gaps = 6/279 (2%)
Strand=Plus/Plus
Query 4083 AGACATTTACTACCAGGGTCCCATTTGGGCCAAGATTCCTCATACCGATGGACACTTTCA 4142
|||||| || ||||||| || |||||||| || |||||| | || ||||| || |||
Sbjct 16827 AGACATCTATCACCAGGGCCCTATTTGGGCGAAAATTCCTGACACTGATGG-CAATTTTT 16885
Query 4143 CCCCTCA-CCGCTGATTGGTGGGTTTGGGCTGAAACACCCGCCTCCTCAAATTTTTATCA 4201
|||| || || || | |||||| ||||| || ||||| ||| | |
Sbjct 16886 GGCCTCGTCCTAACATGGGAAGCTTTGGGTGCAAACATCCACCTCCGATGATTCTGCAGA 16945
Query 4202 AGAACACCCCGGTACCTGCGAATCCTGCAACGACCTTCAGCTCTACTCCGGTAAACTCCT 4261
| || || || || ||||| | ||| | || |||||| || || | || || |
Sbjct 16946 AAAATACTCCAGTCCCTGCAGAACCTCCTGCGGCCTTCACTGAAACGCCTATTAAGTCTT 17005
Query 4262 TCATTACTCAGTACAGCACTGGCCAGGTGTCGGTGCAGATTGACTGGGAGATCCAGAAGG 4321
| |||| |||||| |||||| ||||| | ||| | ||||| |||||| | | ||
Sbjct 17006 TTATTAGTCAGTATTCCACTGGTCAGGTAACAGTGGAAATTGATTGGGAG--CGAAAATC 17063
Query 4322 AGCGGTC--CAAACGCTGGAACCCCGAGGTCCAGTTTAC 4358
|| | |||||||||||| || ||| |||| || ||
Sbjct 17064 AGAATCCAGCAAACGCTGGAATCCAGAGATCCAATTCAC 17102
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15072600444720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |