Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_014468.1
Length=4286
Score E
Sequences producing significant alignments: (Bits) Value
seq401307 161 3e-36
>seq401307
Length=51916
Score = 161 bits (178), Expect = 3e-36
Identities = 234/321 (73%), Gaps = 7/321 (2%)
Strand=Plus/Plus
Query 2836 TACTTTGGTTACAGCACGCCTTGGGGATACTTCGATTTCAATCGATTCCACTGCCACTTT 2895
||||| ||||||||||| ||| ||| ||| |||| ||||| ||||||| |||||||
Sbjct 15840 TACTTGGGTTACAGCACCCCT-GGGCCTACCTCGACTTCAACAGATTCCAGTGCCACTGG 15898
Query 2896 TCTCCCAGGGACTGGCAGCGGCTCATCAACAACCACTGGGGCATCCGCCCCAAGCGGCTC 2955
|| | | ||||| |||||||||||| ||||| ||||||||||||| || ||| | |
Sbjct 15899 AGTCTCCGAGACTGTCAGCGGCTCATCCACAACTACTGGGGCATCCGACCAAAG-GCTTG 15957
Query 2956 CA-CTTTAAGCTCTTCAACATCCAGGTCAAGGAGGTCACGACGACCGACGGCACCACGAC 3014
| | || | |||||||| || || |||||||||| | | | | ||||| | |||
Sbjct 15958 TAGAATCAAAATTTTCAACATACAAGTTAAGGAGGTCATGGAGGCAGCAGGCACAAAGAC 16017
Query 3015 CATCGCCAACAACCTCACCAGCACCATACAGGTCTTTGCGGA-CACGGAGTACCAGCTCC 3073
|| ||||| ||||| || ||||| ||| | ||||| || || | |||||||| |
Sbjct 16018 AATTGCCAATAACCTAACGTCAACCATCCAGATTTTTGCAGATGACACA-TACCAGCTGC 16076
Query 3074 CGTACGTGCTCGGCAACGCCCACGAGGGCTGCCTG-CCGCCGTTCCCGGCGGACGTCTTC 3132
| || ||| | || || ||| ||||| ||| || |||| ||||||| || || ||
Sbjct 16077 CCTATGTGATTGGAAATGCCACTGAGGGGTGCTTGCCCGCTTTTCCCGG-TGATGTTTTT 16135
Query 3133 ATGCTGCCGCAGTACGCGTAC 3153
||| |||| |||||| ||||
Sbjct 16136 ATGTTGCCTCAGTACTGGTAC 16156
Score = 116 bits (128), Expect = 1e-22
Identities = 130/174 (75%), Gaps = 0/174 (0%)
Strand=Plus/Plus
Query 1153 CAAGCGCAACACCGTCTGGCTCTTCGGGCCGGCCACGACCGGCAAGACGAACCTCGCCGA 1212
|||| ||||| || ||||| ||| | | || || || ||| ||||||| | | ||| ||
Sbjct 14054 CAAGGGCAACGCCATCTGGTTCTACAGACCTGCGACCACCAGCAAGACAAGCATCGTGGA 14113
Query 1213 GGCCATCAGCCACTCGGTGCCCTTCTACGGCTGCGTCAACTGGACCAACGAGAACTTCCC 1272
||| ||| || | ||||| || || ||||| | |||||||| || |||||||| ||
Sbjct 14114 GGCTATCGCCCGTGCTGTGCCATTTTATGGCTGTGGAAACTGGACTAATGAGAACTTGCC 14173
Query 1273 CTTCAACGACTGCGTGGACAAGATGATCATCTGGTGGGAGGAGGGCAAGATGAC 1326
||||| ||||| | || ||||| | || ||||||||||| || ||||||||
Sbjct 14174 TTTCAATGACTGGGCAGATTAGATGGTGATTTGGTGGGAGGAAGGAAAGATGAC 14227
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 13540495454460
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |