Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bison_20bison_20bison_20[refseq_20GCF_5F000754665.1_202014-10-08] 128,431 sequences; 2,828,031,685 total letters Query= NC_012868.1 Length=6094 Score E Sequences producing significant alignments: (Bits) Value seq1012 80.6 1e-11 >seq1012 Length=1223 Score = 80.6 bits (88), Expect = 1e-11 Identities = 118/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 3186 TCCTTTGAGCTTGATGCTGTTGGCGCTTTGCGTCTTTCTCCTCTGCGTCGTGGTTTAGCT 3245 ||||| | ||| | || ||||||||| | ||||||||||| |||||||||| | ||| Sbjct 1221 TCCTTCGCGCTGGCCGCCGTTGGCGCTCTCCGTCTTTCTCCCTTGCGTCGTGGCCTTGCT 1162 Query 3246 ATTGACTCTAAGGTTGATTTTTTCACTTTCTATATTCCGCATCGCCATGTTTATGGTGAC 3305 ||| |||| || | |||| |||| | | | || | ||| | |||| ||||| | Sbjct 1161 CTTGCCTCTCCTGTCGCCCTTTTTCCTTTTTCTGTCCCTCCTCGTCCCGTTTCTGGTGCC 1102 Query 3306 CAGTGGATTCAATTTATGCGTGATGGTGTTGATGCCGCACCACTCCC 3352 | |||| ||| || ||| | ||||||| |||| | || ||||| Sbjct 1101 CCGTGGCTTCCGTTCCTGCCGGCTGGTGTTCCTGCCCCTCCTCTCCC 1055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19357590740072