Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bison_20bison_20bison_20[refseq_20GCF_5F000754665.1_202014-10-08] 128,431 sequences; 2,828,031,685 total letters Query= NC_028045.1 Length=1767 Score E Sequences producing significant alignments: (Bits) Value seq123528 77.0 4e-11 seq123421 77.0 4e-11 >seq123528 Length=15775556 Score = 77.0 bits (84), Expect = 4e-11 Identities = 45/47 (96%), Gaps = 0/47 (0%) Strand=Plus/Minus Query 986 CAGATACTACACTTGATCTTAGCCAAAAGGCCGAGGAGTGATCTAAA 1032 ||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 1292966 CAGATACTACACTTGATCTTAGCCAAAAGGCCGAGAAGCGATCTAAA 1292920 >seq123421 Length=12497125 Score = 77.0 bits (84), Expect = 4e-11 Identities = 45/47 (96%), Gaps = 0/47 (0%) Strand=Plus/Plus Query 986 CAGATACTACACTTGATCTTAGCCAAAAGGCCGAGGAGTGATCTAAA 1032 ||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 8144894 CAGATACTACACTTGATCTTAGCCAAAAGGCCGAGAAGCGATCTAAA 8144940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5538032588618