Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bos_20taurus_20[refseq_20GCF_5F000003055.6_202014-11-25] 3,144 sequences; 2,670,139,648 total letters Query= NC_003287.2 Length=6407 Score E Sequences producing significant alignments: (Bits) Value seq20 132 2e-27 >seq20 Length=72042655 Score = 132 bits (146), Expect = 2e-27 Identities = 85/93 (91%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 5624 CCGTCAAGCTCTAAATCGGGGGCTCCCTTTAGGGTTCCGATTTAGTGCTTTACGGCACCT 5683 ||||| |||||||| ||||||||||| |||||| ||||||||||||||||| || |||| Sbjct 7235543 CCGTCTAGCTCTAAGTCGGGGGCTCCGATTAGGGATCCGATTTAGTGCTTTAAGGTACCT 7235484 Query 5684 CGACCCCAAAAAACTTGATTTGGGTGATGGTTC 5716 |||||||||||||||||||| |||||||||||| Sbjct 7235483 CGACCCCAAAAAACTTGATTAGGGTGATGGTTC 7235451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 20386478904736