Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camelus_20ferus_20[refseq_20GCF_5F000311805.1_202013-07-30] 13,334 sequences; 2,009,194,609 total letters Query= NC_014468.1 Length=4286 Score E Sequences producing significant alignments: (Bits) Value seq876 77.0 9e-11 >seq876 Length=5045497 Score = 77.0 bits (84), Expect = 9e-11 Identities = 145/210 (69%), Gaps = 14/210 (7%) Strand=Plus/Minus Query 3924 CATGGGCGGCTTCGGGCTCAAGAACCCGCCGCCGCAGATCCTCGTCAAGAACACGCCCGT 3983 |||||| || || || ||| ||||| || || ||| || || || ||||| | || Sbjct 3396752 CATGGGGGGTTTGGGTGTCATCAACCCCCCTCCAATGATTCTAGTAAAAAACACTGCTGT 3396693 Query 3984 GCCCGCCGTGCCGCCCACGA---CCTTCACACCGCAGAAGGTCAACTCCTTCATCACGCA 4040 ||| ||| | |||| || | || ||| || | | | || ||||| | || Sbjct 3396692 GCCAGCC---CAGCCCTGGAAAGCATTTACAG----GAGGCCCTAGTCTTTCATTAATCA 3396640 Query 4041 GTACTCCACCGGCCAGGTCACCGTCGAGATCGAGTGGGAGCTGCGCAAGG--AGAAGAGC 4098 ||||||||| || ||||| || || ||||| ||||||||| | |||| | || || Sbjct 3396639 GTACTCCACAGGACAGGTTACAGTAGAGATGGAGTGGGAGAT--TGAAGGAAAAAACAGT 3396582 Query 4099 AAGCGCTGGAACCCCGAGATCCAGTACACC 4128 |||| |||||| || ||||| ||||||||| Sbjct 3396581 AAGCACTGGAATCCAGAGATTCAGTACACC 3396552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 13601216100810