Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11-
02] 3,268 sequences; 2,410,976,875 total letters
Query= NC_006148.1
Length=4432
Score E
Sequences producing significant alignments: (Bits) Value
seq37 98.7 3e-17
>seq37
Length=30902991
Score = 98.7 bits (108), Expect = 3e-17
Identities = 176/254 (69%), Gaps = 5/254 (2%)
Strand=Plus/Minus
Query 3836 CCTATTTGGGCTAAAATTCCAAATACAGATGGACATTTTCATCCTTCTCCCAGA-ATGGG 3894
||||||||||| | || || || ||| || || || ||||| |||| | |||||
Sbjct 9272596 CCTATTTGGGCCATGATCCCTGATGTAGAAGGGGTCTTCCAGCCTTC-CCCACATATGGG 9272538
Query 3895 TGGTTTTGGATTAAAACATCCTCCGCCTATGATTCTGATCAAAAATACACCAGTTCCTGC 3954
|| ||||| |||||||||| || |||||||| || || |||||||| || || |||||
Sbjct 9272537 CGGGTTTGGTCTAAAACATCCCCCACCTATGATCCTTATGAAAAATACCCCTGTGCCTGC 9272478
Query 3955 TGATCCTCCAACTACCTTCAATCCAATGCCACAGACTAGTTTCATTACTGAATACAGTAC 4014
||| | || ||| | || ||| | || || ||| | |||| ||
Sbjct 9272477 AGATGTGC---TTAACTTTACAGAAAGCCCAGTAAACAGCTTTATTCATCAATATTCTAG 9272421
Query 4015 AGGACAAGTAACTGTTGAAATGTTGTGGGAGGTACAGAAAGAATCCTCCAAAAGATGGAA 4074
|| || | |||||||||||| ||||| || |||||||| || |||||||||||
Sbjct 9272420 GGGGCAGATTACTGTTGAAATGACATGGGAATTAAAGAAAGAAGATTCTAAAAGATGGAA 9272361
Query 4075 TCCAGAAGTACAGT 4088
|| ||||| ||||
Sbjct 9272360 CCCTGAAGTGCAGT 9272347
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 14069897071140
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |