Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11- 02] 3,268 sequences; 2,410,976,875 total letters Query= NC_006148.1 Length=4432 Score E Sequences producing significant alignments: (Bits) Value seq37 98.7 3e-17 >seq37 Length=30902991 Score = 98.7 bits (108), Expect = 3e-17 Identities = 176/254 (69%), Gaps = 5/254 (2%) Strand=Plus/Minus Query 3836 CCTATTTGGGCTAAAATTCCAAATACAGATGGACATTTTCATCCTTCTCCCAGA-ATGGG 3894 ||||||||||| | || || || ||| || || || ||||| |||| | ||||| Sbjct 9272596 CCTATTTGGGCCATGATCCCTGATGTAGAAGGGGTCTTCCAGCCTTC-CCCACATATGGG 9272538 Query 3895 TGGTTTTGGATTAAAACATCCTCCGCCTATGATTCTGATCAAAAATACACCAGTTCCTGC 3954 || ||||| |||||||||| || |||||||| || || |||||||| || || ||||| Sbjct 9272537 CGGGTTTGGTCTAAAACATCCCCCACCTATGATCCTTATGAAAAATACCCCTGTGCCTGC 9272478 Query 3955 TGATCCTCCAACTACCTTCAATCCAATGCCACAGACTAGTTTCATTACTGAATACAGTAC 4014 ||| | || ||| | || ||| | || || ||| | |||| || Sbjct 9272477 AGATGTGC---TTAACTTTACAGAAAGCCCAGTAAACAGCTTTATTCATCAATATTCTAG 9272421 Query 4015 AGGACAAGTAACTGTTGAAATGTTGTGGGAGGTACAGAAAGAATCCTCCAAAAGATGGAA 4074 || || | |||||||||||| ||||| || |||||||| || ||||||||||| Sbjct 9272420 GGGGCAGATTACTGTTGAAATGACATGGGAATTAAAGAAAGAAGATTCTAAAAGATGGAA 9272361 Query 4075 TCCAGAAGTACAGT 4088 || ||||| |||| Sbjct 9272360 CCCTGAAGTGCAGT 9272347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14069897071140