Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11-
02] 3,268 sequences; 2,410,976,875 total letters
Query= NC_006152.1
Length=4642
Score E
Sequences producing significant alignments: (Bits) Value
seq37 80.6 8e-12
>seq37
Length=30902991
Score = 80.6 bits (88), Expect = 8e-12
Identities = 268/414 (65%), Gaps = 21/414 (5%)
Strand=Plus/Minus
Query 4022 CCCATCTGGGCCAAGATCCCAGA----GACGGGGGCGCACTTTCACCCCTCTCCGGCCAT 4077
|| || ||||||| |||||| || || |||| | || || || || || ||
Sbjct 9272596 CCTATTTGGGCCATGATCCCTGATGTAGAAGGGGTC----TTCCAGCCTTCCCCACATAT 9272541
Query 4078 GGGCGGATTCGGACTCAAACACCCACCGCCCATGATGCTCATCAAGAACACGCCTGTGCC 4137
|||||| || || || ||||| || || || ||||| || || || || || ||||||||
Sbjct 9272540 GGGCGGGTTTGGTCTAAAACATCCCCCACCTATGATCCTTATGAAAAATACCCCTGTGCC 9272481
Query 4138 CGGAAATATCACCAGCTTCTCGGACGTGCCCGTCAGCAGCTTCATCACCCAGTACAGCAC 4197
| | || | | ||| | || || || | |||||| || || || |
Sbjct 9272480 TGCAGATGTGCTTAACTTTACAGAAAGCCCAGTAAACAGCTTTATTCATCAATATTCTAG 9272421
Query 4198 CGGGCAGGTCACCGTGGAGATGGAGTGGGAGCTCAAGAAGGAAAACTCCAAGAGGTGGAA 4257
|||||| | || || || ||| ||||| | ||||| ||| | || || || |||||
Sbjct 9272420 GGGGCAGATTACTGTTGAAATGACATGGGAATTAAAGAAAGAAGATTCTAAAAGATGGAA 9272361
Query 4258 CCCAGAGATCCAGTACACAAACAACTACAACGACCCCCAGTTTGTGGACTTTGCCCCGGA 4317
||| || | ||||||||||| ||||| | | || |||||| || | || ||
Sbjct 9272360 CCCTGAAGTGCAGTACACAAATAACTATATTAGTGCTGAGACTGTGGATTTCACACCTGA 9272301
Query 4318 CAGCACCGGGGAATACAGAACCACCAGACCTATCGGAACCCGATA----CCTTACCCGAC 4373
| || ||| | ||| | | || | || ||||| ||||| |||||| | |
Sbjct 9272300 -GGTACTGGGAAGTACCAGGCTTCAAGGGCAATTGGAACTCGATATCTTCCTTACTCATC 9272242
Query 4374 CCCTTTAACCCATTCATGTCGCATACCCTCAATAAACCGTGTATTCGTGTCAGT 4427
| || |||||| | | | || ||||| |||||||||||||| |||||
Sbjct 9272241 CACTGTAACCC--TAA------AATCCTTCAATGAACCGTGTATTCGTATCAGT 9272196
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 14741873051340
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |