Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11- 02] 3,268 sequences; 2,410,976,875 total letters Query= NC_006152.1 Length=4642 Score E Sequences producing significant alignments: (Bits) Value seq37 80.6 8e-12 >seq37 Length=30902991 Score = 80.6 bits (88), Expect = 8e-12 Identities = 268/414 (65%), Gaps = 21/414 (5%) Strand=Plus/Minus Query 4022 CCCATCTGGGCCAAGATCCCAGA----GACGGGGGCGCACTTTCACCCCTCTCCGGCCAT 4077 || || ||||||| |||||| || || |||| | || || || || || || Sbjct 9272596 CCTATTTGGGCCATGATCCCTGATGTAGAAGGGGTC----TTCCAGCCTTCCCCACATAT 9272541 Query 4078 GGGCGGATTCGGACTCAAACACCCACCGCCCATGATGCTCATCAAGAACACGCCTGTGCC 4137 |||||| || || || ||||| || || || ||||| || || || || || |||||||| Sbjct 9272540 GGGCGGGTTTGGTCTAAAACATCCCCCACCTATGATCCTTATGAAAAATACCCCTGTGCC 9272481 Query 4138 CGGAAATATCACCAGCTTCTCGGACGTGCCCGTCAGCAGCTTCATCACCCAGTACAGCAC 4197 | | || | | ||| | || || || | |||||| || || || | Sbjct 9272480 TGCAGATGTGCTTAACTTTACAGAAAGCCCAGTAAACAGCTTTATTCATCAATATTCTAG 9272421 Query 4198 CGGGCAGGTCACCGTGGAGATGGAGTGGGAGCTCAAGAAGGAAAACTCCAAGAGGTGGAA 4257 |||||| | || || || ||| ||||| | ||||| ||| | || || || ||||| Sbjct 9272420 GGGGCAGATTACTGTTGAAATGACATGGGAATTAAAGAAAGAAGATTCTAAAAGATGGAA 9272361 Query 4258 CCCAGAGATCCAGTACACAAACAACTACAACGACCCCCAGTTTGTGGACTTTGCCCCGGA 4317 ||| || | ||||||||||| ||||| | | || |||||| || | || || Sbjct 9272360 CCCTGAAGTGCAGTACACAAATAACTATATTAGTGCTGAGACTGTGGATTTCACACCTGA 9272301 Query 4318 CAGCACCGGGGAATACAGAACCACCAGACCTATCGGAACCCGATA----CCTTACCCGAC 4373 | || ||| | ||| | | || | || ||||| ||||| |||||| | | Sbjct 9272300 -GGTACTGGGAAGTACCAGGCTTCAAGGGCAATTGGAACTCGATATCTTCCTTACTCATC 9272242 Query 4374 CCCTTTAACCCATTCATGTCGCATACCCTCAATAAACCGTGTATTCGTGTCAGT 4427 | || |||||| | | | || ||||| |||||||||||||| ||||| Sbjct 9272241 CACTGTAACCC--TAA------AATCCTTCAATGAACCGTGTATTCGTATCAGT 9272196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14741873051340