Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratotherium_20simum_20simum_20[refseq_20GCF_5F000283155.1_202012-
07-31] 3,087 sequences; 2,464,367,180 total letters
Query= NC_004828.1
Length=4694
Score E
Sequences producing significant alignments: (Bits) Value
seq55 165 2e-37
>seq55
Length=16538760
Score = 165 bits (182), Expect = 2e-37
Identities = 196/262 (75%), Gaps = 3/262 (1%)
Strand=Plus/Plus
Query 1248 TGCGACCACCGGCAAGACCAACATCGCGGAGGCTATTGCCCATGCTGTGCCGTTCTATGG 1307
||| ||||| || || || |||||| | ||||| ||||||||||||||||| ||||||||
Sbjct 15365966 TGCAACCACGGGAAACACAAACATCACAGAGGCAATTGCCCATGCTGTGCCCTTCTATGG 15366025
Query 1308 ATGCGTTAACTGGACCAACGAGAACTTTCCGTTCAACGACTGCGTCGAAAAAATGATTAT 1367
|| ||||||||||| || || |||||| | || || ||||| || || |||||||| ||
Sbjct 15366026 CTGTGTTAACTGGACTAATGAAAACTTT-CATTTAATGACTGTGTGGACAAAATGATAAT 15366084
Query 1368 CTGGTGGGAGGAGGGCAAAATGACCGCCAAAGTGGTGGAAACAGCCAAGGCGATTCTGGG 1427
|||||||| ||||| |||||||| || || || || | || || | ||| ||||
Sbjct 15366085 TTGGTGGGAAGAGGGAAAAATGACTAAAAATGTTGTTGAGTCTGCAAAACCAATTTTGGG 15366144
Query 1428 AGGATCT-CGGGTGAGAGTGGACCAAAAATGCAAAGCTTCGGTTCCGATCGAACCGACGC 1486
||| ||| ||| | | | | || | ||||| || | || || | || ||||| || |
Sbjct 15366145 AGGGTCTGCGGTTCACA-TTGAGCGGAAATGTAAGGGATCTGTACAAATGGAACCCACTC 15366203
Query 1487 CGGTCATTATTACCAGTAACAC 1508
| || | || |||||||||||
Sbjct 15366204 CTGTTGTAATCACCAGTAACAC 15366225
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 14908296618345
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |