Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratotherium_20simum_20simum_20[refseq_20GCF_5F000283155.1_202012-
07-31] 3,087 sequences; 2,464,367,180 total letters
Query= NC_016744.1
Length=5065
Score E
Sequences producing significant alignments: (Bits) Value
seq55 78.8 3e-11
>seq55
Length=16538760
Score = 78.8 bits (86), Expect = 3e-11
Identities = 100/136 (74%), Gaps = 9/136 (7%)
Strand=Plus/Plus
Query 1268 CTACGGCTGTGTAAACTGGACTAATGCCAACTTTCCTTTTAATGACTGCCACTGT----C 1323
||| |||||||| ||||||||||||| |||||| | ||||||||||| |||
Sbjct 15366020 CTATGGCTGTGTTAACTGGACTAATGAAAACTTT-CATTTAATGACTG----TGTGGACA 15366074
Query 1324 AACCGCTAGTGTGGTGGGAGGAAGGCCGAATGACTGAAAACATTGTGGAAGTGGCCAAAG 1383
|| | || | |||||||| || || ||||||| |||| |||| || || |||
Sbjct 15366075 AAATGATAATTTGGTGGGAAGAGGGAAAAATGACTAAAAATGTTGTTGAGTCTGCAAAAC 15366134
Query 1384 CAATTTTGGGAGGATC 1399
||||||||||||| ||
Sbjct 15366135 CAATTTTGGGAGGGTC 15366150
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 16095456533650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |