Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratotherium_20simum_20simum_20[refseq_20GCF_5F000283155.1_202012- 07-31] 3,087 sequences; 2,464,367,180 total letters Query= NC_016752.1 Length=4595 Score E Sequences producing significant alignments: (Bits) Value seq55 95.1 4e-16 >seq55 Length=16538760 Score = 95.1 bits (104), Expect = 4e-16 Identities = 101/130 (78%), Gaps = 5/130 (4%) Strand=Plus/Plus Query 1092 TATGGCTGTGTGAACTGGAACAACGCAAATTTCCCATTTAATGACTGTGTAGACAAAATG 1151 ||||||||||| ||||||| || | ||| || | ||||||||||||||| ||||||||| Sbjct 15366021 TATGGCTGTGTTAACTGGACTAATGAAAACTTTC-ATTTAATGACTGTGTGGACAAAATG 15366079 Query 1152 CTAATTTGGTGGGAGGAGGGATCGATGA--AAGAATGTCACGTAGAGGCAGCAATGGCAA 1209 ||||||||||||| |||||| |||| || ||||| || ||| | |||| ||| Sbjct 15366080 ATAATTTGGTGGGAAGAGGGAAAAATGACTAAAAATGT--TGTTGAGTCTGCAAAACCAA 15366137 Query 1210 TACTAGGAGG 1219 | | ||||| Sbjct 15366138 TTTTGGGAGG 15366147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14591507314800