Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cervus_20elaphus_20hippelaphus_20[genbank_20GCA_5F002197005.1_202017 -06-19] 11,479 sequences; 3,438,623,608 total letters Query= NC_001422.1 Length=5386 Score E Sequences producing significant alignments: (Bits) Value seq11 150 6e-33 >seq11 Length=140388259 Score = 150 bits (166), Expect = 6e-33 Identities = 88/90 (98%), Gaps = 1/90 (1%) Strand=Plus/Plus Query 3897 TCTAATTTGTCTAGGAAATAACCGTCAGGATTGACACCCTCCCAATTGTATGTTTTCATG 3956 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 20464725 TCTAATTTGTCTAGGAAATAACCGTCAGGATTGACACCCTCCCAATTGTATGTTTTCATG 20464784 Query 3957 CCTCCAAATCTTGGAGGCTTTT-TTATGGT 3985 |||||||||||||||||||||| | ||||| Sbjct 20464785 CCTCCAAATCTTGGAGGCTTTTCTGATGGT 20464814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17121050155485