Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_001401.2 Length=4679 Score E Sequences producing significant alignments: (Bits) Value seq73 269 8e-69 >seq73 Length=7004857 Score = 269 bits (298), Expect = 8e-69 Identities = 405/566 (72%), Gaps = 26/566 (5%) Strand=Plus/Plus Query 2795 TGGGAACTAATACGATGGCTACAGGCAGTGGCGCACCAATGGCAGACAATAACGAGGGCG 2854 ||| | ||| ||| |||||| |||| |||| ||||||| ||||||| |||| Sbjct 1720645 TGGCATCTAGTACAATGGCTGCAGGTGCTGGCAGCCCAATGGGCGACAATATGCAGGGTT 1720704 Query 2855 CCGACGGAGTGGGTAATTCCTCGGGAAATTGGCATTGCGATTCCACATGGATGGGCGACA 2914 |||| |||||||| ||||| |||||| ||||||||||||||||| ||| |||| | | Sbjct 1720705 CCGATGGAGTGGGCGCTTCCTTGGGAAACTGGCATTGCGATTCCACGTGGGTGGGTG--A 1720762 Query 2915 GAGTCATCACCACCAGCACCCGAACCTGGGCCCTGCCCACCTACAACAACCACCTCTACA 2974 |||||||||| | ||| | ||||||| |||||| |||||| |||||||||| ||| Sbjct 1720763 GAGTCATCACAAAATCTACCGGTACCTGGGTCCTGCCAACCTACGACAACCACCTGCACA 1720822 Query 2975 AACAAATTTCCAGCCAATCAGGAGC--CTCG----AACGACAATCACTACTTTGGCTACA 3028 | |||| || | | || ||||| || | || |||| || |||| ||| | || Sbjct 1720823 AGGAAAT---CAACAACTCTGGAGCGACTGGAAACAATGACACCCAGTACTATGGATTCA 1720879 Query 3029 GCACCCCTTGGGGGTATTTTGACTTCAACAGATTCCACTGCCACTTTTCACCACGTGACT 3088 ||| || | | | || | |||||| | | || ||| |||||||||| || | || | Sbjct 1720880 GCA-CCTGTAGAGATACCTGGACTTCCATCGGTTTCACGGCCACTTTTCCCCTCAAGATT 1720938 Query 3089 GGCAAAGACTCATCAACAACAACTGGGGATTCCGACCCAAGAGACTCAACTTCAAGCTCT 3148 ||||| |||||||| |||||||||| |||| || || || |||| |||| | Sbjct 1720939 GGCAACATCTCATCAATAACAACTGGG------GACCAAAAAGGCTTGACTT-TAGCTTT 1720991 Query 3149 TTAACATTCAAGTCAAAGAGGTCACGCAGAATGACGGTACGACGACGATTGCCAATAACC 3208 | || |||||||| |||| |||| | ||||| || | ||| || || ||||| | Sbjct 1720992 TCCACGTTCAAGTCTAAGAAGTCATGACACATGACAACACAATGACTATCGCTAATAATC 1721051 Query 3209 TTACCAGCACGGTTCAGGTGTTTACTGACTCGGAGTACCAGCTCCCGTACGTCCTCGGCT 3268 | || ||||| | ||||||||| | |||||||| || ||||| |||||| | ||| Sbjct 1721052 TCACAAGCACAATCCAGGTGTTTGCGGACTCGGACTATCAGCTACCGTACCACAACGG-- 1721109 Query 3269 CGG--CGCA-TC-AAGGATGCCTCCCGCCGTTCCCAGCAGACGTCTTCATGGTGCCACAG 3324 || |||| || ||||| || || | ||| ||||||| || ||||||| |||||| Sbjct 1721110 -GGAACGCACTCAAAGGAACACTGCCTCTGTTTCCAGCAGGTGTATTCATGGCTCCACAG 1721168 Query 3325 TATGGATACCTCACCCTGAACAACGG 3350 ||||||| || || || ||||| || Sbjct 1721169 CATGGATATCTAACTCTCAACAATGG 1721194 Score = 266 bits (294), Expect = 1e-67 Identities = 491/716 (69%), Gaps = 32/716 (4%) Strand=Plus/Plus Query 1103 CCAAATCAAGGCTGCCTTGGACAATGCGGGAAAGATTATGAGCCTGACTAAAACCGCCCC 1162 ||| || || |||| |||| ||||| | ||||| ||||| ||||| ||||| ||| Sbjct 1718996 CCAGATTAAATCTGCACTGGAGAATGCATGTAAGATCATGAGTCTGACAAAAACAGCCAG 1719055 Query 1163 CGACTACCTGGTGGGCCAGCAGCCCGTGGAGGACATTTCCAGCAATCGGATTTATAAAAT 1222 || || ||| || | | | | |||||| | ||||||||| || ||||| Sbjct 1719056 TGATTATTTGGCCGGTAATGAACTGTCAAATGACATTAAGACCAATCGGATATACAAAAT 1719115 Query 1223 TTTGGAACTAAACGGGTACGATCCCCAATATGCGGCTTCCGT-CTTTCTGG--GATGGGC 1279 || |||||||| || |||||||| |||||| | || || | ||| |||| Sbjct 1719116 GTTTGAACTAAATGGATACGATCCTGCATATGCTGGAAGTGTGCTGTATGGCTGATGT-- 1719173 Query 1280 CACGAAAAAGTTCGGCAAGAGGAACACCATCTGGCTGTTTGGGCCTGC---AACTACCGG 1336 || |||||||| || || || ||||| |||||||||||||| ||| | ||| ||||| Sbjct 1719174 CAAAAAAAAGTTTGGGAAAAGAAACACTATCTGGCTGTTTGGTCCTTCCACAACGACCGG 1719233 Query 1337 GAAGACCAACATCGCGGAGGCCATAGCCCACACTGTGCCCTTCTACGGGTGCGTAAACTG 1396 ||||| ||| | || || ||||| || |||| || || || || || || | || Sbjct 1719234 AAAGACAAACTTTGCAGAAGCCATCTTGCATGCTGTTCCATTTTATGGATGTGTTCATTG 1719293 Query 1397 GACCAATGAGAACTTTCCCTTCAACGACTGTGTCGACAAGATGGTGATCTGGTGGGAGGA 1456 |||||||| |||||||| ||| | || || || |||| |||| Sbjct 1719294 AACCAATGAAAACTTTCCATTCTATGATTGCATC---AAGA---------------AGGA 1719335 Query 1457 GGGGAAGATGACCGCCAAGGTCGTGGAGTCGGCCAAAGCCATTCTCGGAGGAAGCAAGGT 1516 || ||||| || ||||| || ||||| || || | |||||||| ||||| || Sbjct 1719336 ----AAAATGACTGCTAAGGTTGTCGAGTCTGCAAAGGTCATTCTCGATGGAAGTCCTGT 1719391 Query 1517 GCGCGTGGACCAGAAATGCAAGTCCTCGGCCCAGATAGACCCGACTCCCGTGATCGTCAC 1576 | | ||||| || ||||||||||| |||| || | ||| || ||||| || || Sbjct 1719392 TTGTATTGACCAAAAGTGCAAGTCCTCTCAACAGACTGATCTGACACCAGTGATTGTGAC 1719451 Query 1577 CTCCAACACCAACATGTGCGCCGTGATTGACGGGAACTCAACGACCTTCGAACACCAGCA 1636 || || || |||||||| || || || || || || |||| || |||||||| || || Sbjct 1719452 TTCAAATACTAACATGTGTGCTGTCATGGATGGAAATTCAATAACATTCGAACATCAACA 1719511 Query 1637 GCCGTTGCAAGACCGGATGTTCAAATTTGAACTCACCCGCCGTCTGGATCATGACTTTGG 1696 ||| ||| |||| | || |||||||||||||| | ||| || |||||||||||||| Sbjct 1719512 GCCATTGGAAGATCAAATATTCAAATTTGAACTTGTCTGCCAACTCGATCATGACTTTGG 1719571 Query 1697 GAAGGTCACCAAGCAGGAAGTCAAAGACTTTTTCCGGTGGGCAAAGGATCACGTGGTTGA 1756 |||| ||| || || ||||||| || || |||||||||| | | | ||| Sbjct 1719572 GAAGACCACAAAAACAGAGATCAAAGAGTTCTTTGCCTGGGCAAAGGCCAATGAGTGTGA 1719631 Query 1757 GGTGGAGCATGAATTCTACGTCAAAAAGGGTGGA-GCCAAGAAAAGACCCGCCCCC 1811 || || ||| || | || | ||||||||| || ||||||||| |||||||| Sbjct 1719632 TGTCACGCGTGAGTTTAATGT-TAGAAGGGTGGAGGCTAAGAAAAGATCCGCCCCC 1719686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14859696515940