Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_001701.1 Length=5106 Score E Sequences producing significant alignments: (Bits) Value seq73 154 5e-34 >seq73 Length=7004857 Score = 154 bits (170), Expect = 5e-34 Identities = 298/432 (69%), Gaps = 21/432 (5%) Strand=Plus/Plus Query 3057 ATGGGCGAC--TCTTCAGGGGGTGCCGATGGAGTGGGTAATGCCTCGGGAAATTGGCATT 3114 ||||||||| | | ||||| | ||||||||||||| | ||| |||||| ||||||| Sbjct 1720683 ATGGGCGACAATATGCAGGG--TTCCGATGGAGTGGGCGCTTCCTTGGGAAACTGGCATT 1720740 Query 3115 GCGATTCCCAATGGATGGGAAACACAGTCATCACAAAGACCACCAGAACCTGGGTCCTGC 3174 |||||||| ||| |||| | | ||||||||||| | ||| | ||||||||||||| Sbjct 1720741 GCGATTCCACGTGGGTGGGTGAGA--GTCATCACAAAATCTACCGGTACCTGGGTCCTGC 1720798 Query 3175 CAAGCTACAACAACCACATCTACAAAGCAATTACCAGC---GGAACCTCTCAAGATGCAA 3231 ||| |||| |||||||| | |||| | ||| | || | ||| | || || ||| Sbjct 1720799 CAACCTACGACAACCACCTGCACAAGGAAATCAACAACTCTGGAGCGACT--GGAAACAA 1720856 Query 3232 --ATGTCCAGTATGCAGGATACAGTACCCCCTGGGGGTACTTTGATTTCAACCGCTTCCA 3289 | |||||| |||| ||| | || | | | ||| | || ||| | || || || Sbjct 1720857 TGACACCCAGTACTATGGATTCAGCA-CCTGTAGAGATACCTGGACTTCCATCGGTTTCA 1720915 Query 3290 CTGCCACTTCTCCCCTAGAGACTGGCAGAGACTTATCAACAACCATTGGGGAATCAGACC 3349 | ||||||| |||||| ||| ||||| || ||||| ||| | |||| |||| Sbjct 1720916 CGGCCACTTTTCCCCTCAAGATTGGCAACATCTCATCAATAACAACTGGG------GACC 1720969 Query 3350 CAAGTCTCTTAAATTCAAGATCTTCAATGTCCAAGTCAAAGAAGTCACAACGCAGGATCA 3409 || ||| | || || | ||| | || |||||| ||||||||| || || || | Sbjct 1720970 AAAAAGGCTTGACTT-TAGCTTTTCCACGTTCAAGTCTAAGAAGTCATGACACATGACAA 1721028 Query 3410 GACAAAGACCATTGCAAACAATCTCACCTCAACAATTCAAGTCTTTACGGATGATGAGCA 3469 |||| ||| || || || |||||||| ||||| || || ||| |||| || | Sbjct 1721029 CACAATGACTATCGCTAATAATCTCACAAGCACAATCCAGGTGTTTGCGGACTCGGACTA 1721088 Query 3470 TCAACTCCCGTA 3481 ||| || ||||| Sbjct 1721089 TCAGCTACCGTA 1721100 Score = 80.6 bits (88), Expect = 9e-12 Identities = 175/256 (68%), Gaps = 11/256 (4%) Strand=Plus/Plus Query 4269 CAGGGACCTATTGGGGCAAAAATACCGAAGACTGATGGTAAATTCCATCCTTCTCCGAAT 4328 |||||||| ||| || | |||| || | || ||||| | || | ||| || ||| Sbjct 1722152 CAGGGACCAATTTGGTCTAAAAGTCCTCACACAGATGGGCATTTTCCTCCCTCACCGCCG 1722211 Query 4329 CTCGGAGGATTTGGCCTGCACAATCCACCACCGCAGGTGTTCATCAAGAATACACCAGTG 4388 | || | |||||| ||| | |||| ||||| || | | || || ||||| ||||| Sbjct 1722212 ATGGGTGTATTTGGACTGAAACATCC-CCACCTCAAATTCTAATAAAAAATACTCCAGTT 1722270 Query 4389 CCTGCAGACCCTCCAGTAGAATACGTGCA---CCAG-AAGTGGAATTCCTACATAACCCA 4444 |||||| | |||||| | ||||||| |||| ||| || || | ||| || || Sbjct 1722271 CCTGCAAATCCTCCAACA----ACGTGCAACACCAGCAAGATCAACTCGTGCATCACTCA 1722326 Query 4445 GTACTCTACGGGCCA-GTGTACAGTAGAGATGGTGTGGGAGCTGAGAAAAGAGAATTCAA 4503 ||| || || || || ||| | || || || | |||||||| |||||| || | Sbjct 1722327 GTATTCCACAGGACAAGTG-ATGGTTGAAATCGAATGGGAGCTTCAAAAAGAATCATCCA 1722385 Query 4504 AGAGATGGAACCCAGA 4519 |||||||||| ||||| Sbjct 1722386 AGAGATGGAATCCAGA 1722401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16225995054335