Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_001729.1 Length=4726 Score E Sequences producing significant alignments: (Bits) Value seq73 244 3e-61 >seq73 Length=7004857 Score = 244 bits (270), Expect = 3e-61 Identities = 402/573 (70%), Gaps = 20/573 (3%) Strand=Plus/Plus Query 2792 CCACAAGTTTGGGATCTAATACAATGGCTTCAGGCGGTGGCGCACCAATGGCAGACAATA 2851 || ||| ||||| ||||| |||||||||| |||| | |||| ||||||| ||||||| Sbjct 1720636 CCTCAAATTTGGCATCTAGTACAATGGCTGCAGGTGCTGGCAGCCCAATGGGCGACAATA 1720695 Query 2852 ACGAGGGTGCCGATGGAGTGGGTAATTCCTCAGGAAATTGGCATTGCGATTCCCAATGGC 2911 ||||| ||||||||||||| ||||| ||||| ||||||||||||||| ||| Sbjct 1720696 TGCAGGGTTCCGATGGAGTGGGCGCTTCCTTGGGAAACTGGCATTGCGATTCCACGTGGG 1720755 Query 2912 TGGGCGACAGAGTCATCACCACCAGCACCAGAACCTGGGCCCTGCCCACTTACAACAACC 2971 |||| | ||||||||||| | ||| | ||||||| |||||| || ||| |||||| Sbjct 1720756 TGGGTG--AGAGTCATCACAAAATCTACCGGTACCTGGGTCCTGCCAACCTACGACAACC 1720813 Query 2972 ATCTCTACAAGCAAATCTCCAGCCAATCAGGAG---CTTCAAAC---GACAACCACTACT 3025 | || ||||| |||| || | | || |||| || |||| |||| ||| |||| Sbjct 1720814 ACCTGCACAAGGAAAT---CAACAACTCTGGAGCGACTGGAAACAATGACACCCAGTACT 1720870 Query 3026 TTGGCTACAGCACCCCTTGGGGGTATTTTGACTTTAACAGATTCCACTGCCACTTCTCAC 3085 ||| | ||||| || | | | || | ||||| | | || ||| ||||||| || | Sbjct 1720871 ATGGATTCAGCA-CCTGTAGAGATACCTGGACTTCCATCGGTTTCACGGCCACTTTTCCC 1720929 Query 3086 CACGTGACTGGCAGCGACTCATTAACAACAACTGGGGATTCCGGCCCAAGAAACTCAGCT 3145 | | || ||||| | ||||| || |||||||||||| || || | || || Sbjct 1720930 CTCAAGATTGGCAACATCTCATCAATAACAACTGGGGA------CCAAAAAGGCTTGACT 1720983 Query 3146 TCAAGCTCTTCAACATCCAAGTTAGAGGGGTCACGCAGAACGATGGCACGACGACTATTG 3205 | |||| ||| || | ||||| || |||| | | || ||| | |||||| | Sbjct 1720984 T-TAGCTTTTCCACGTTCAAGTCTAAGAAGTCATGACACATGACAACACAATGACTATCG 1721042 Query 3206 CCAATAACCTTACCAGCACGGTTCAAGTGTTTACGGACTCGGAGTATCAGCTCCCGTACG 3265 | ||||| || || ||||| | || |||||| |||||||||| |||||||| |||||| Sbjct 1721043 CTAATAATCTCACAAGCACAATCCAGGTGTTTGCGGACTCGGACTATCAGCTACCGTACC 1721102 Query 3266 TGCTC-GGGTCGGCGCACCAAGGCTGTCTCCCGCCGTTTCCAGCGGACGTCTTCATGGTC 3324 | ||| || | | |||| || || | ||||||||| | || ||||||| Sbjct 1721103 ACAACGGGGAACGCACTCAAAGGAACACTGCCTCTGTTTCCAGCAGGTGTATTCATGGCT 1721162 Query 3325 CCTCAGTATGGATACCTCACCCTGAACAACGGA 3357 || ||| ||||||| || || || ||||| ||| Sbjct 1721163 CCACAGCATGGATATCTAACTCTCAACAATGGA 1721195 Score = 210 bits (232), Expect = 7e-51 Identities = 241/320 (75%), Gaps = 3/320 (1%) Strand=Plus/Plus Query 3985 ACTGGAAC-TGTCAATCATCAGGGGGCCTTACCTGGCATGGTGTGGCAAGATCGTGACGT 4043 ||||||| ||||||||| || || ||| | || || ||||| |||||||||| ||| || Sbjct 1722086 ACTGGAAAATGTCAATCACCAAGGAGCCGTTCC-GGAATGGTATGGCAAGATCATGAAGT 1722144 Query 4044 GTACCTTCAAGGACCTATCTGGGCAAAGATTCCTCACACGGATGGACACTTTCATCCTTC 4103 || | || ||||| || ||| | || | ||||||||| ||||| || |||| ||| || Sbjct 1722145 TCACTTCCAGGGACCAATTTGGTCTAAAAGTCCTCACACAGATGGGCATTTTCCTCCCTC 1722204 Query 4104 TCCTCTGATGGGAGGCTTTGGACTGAAACATCCGCCTCCTCAAATCATGATCAAAAATAC 4163 || | |||||| | ||||||||||||||||| || |||||||| | || |||||||| Sbjct 1722205 ACCGCCGATGGGTGTATTTGGACTGAAACATCC-CCACCTCAAATTCTAATAAAAAATAC 1722263 Query 4164 TCCGGTACCGGCAAATCCTCCGACGACTTTCAGCCCGGCCAAGTTTGCTTCATTTATCAC 4223 ||| || || ||||||||||| || || | || | | |||| | || | ||||| Sbjct 1722264 TCCAGTTCCTGCAAATCCTCCAACAACGTGCAACACCAGCAAGATCAACTCGTGCATCAC 1722323 Query 4224 TCAGTACTCCACTGGACAGGTCAGCGTGGAAATTGAGTGGGAGCTACAGAAAGAAAACAG 4283 |||||| ||||| ||||| || | || ||||| || |||||||| || |||||| Sbjct 1722324 TCAGTATTCCACAGGACAAGTGATGGTTGAAATCGAATGGGAGCTTCAAAAAGAATCATC 1722383 Query 4284 CAAACGTTGGAATCCAGAGA 4303 ||| | ||||||||||||| Sbjct 1722384 CAAGAGATGGAATCCAGAGA 1722403 Score = 208 bits (230), Expect = 2e-50 Identities = 499/747 (67%), Gaps = 36/747 (5%) Strand=Plus/Plus Query 1100 CCAGATCAAGGCCGCGCTGGACAATGCCTCCAAGATCATGAGCCTGACAAAGACGGCTCC 1159 |||||| || | || ||||| ||||| | ||||||||||| |||||||| || || Sbjct 1718996 CCAGATTAAATCTGCACTGGAGAATGCATGTAAGATCATGAGTCTGACAAAAACAGCCAG 1719055 Query 1160 GGACTACCTGGTGGGCAGCAACCCGCCGGAGGACATTACCAAAAATCGGATCTACCAAAT 1219 || || ||| || | | | | | | ||||||| | |||||||| ||| |||| Sbjct 1719056 TGATTATTTGGCCGGTAATGAACTGTCAAATGACATTAAGACCAATCGGATATACAAAAT 1719115 Query 1220 CCTGGAGCTGAACGGGTACGATCC-GCAGTACGCGGCCTCCGTCTTCCTGGGCTG-GGCG 1277 | || || || || |||||||| ||| || || | || | ||||| | Sbjct 1719116 GTTTGAACTAAATGGATACGATCCTGCA-TATGCTGGAAGTGTGCTGTATGGCTGATGTC 1719174 Query 1278 CAAAAGAAGTTCGGGAAGAGGAACACCATCTGGCTCTTTGGGCCGGCC---ACGACGGGT 1334 |||| ||||| ||||| || ||||| |||||||| ||||| || || ||||| || Sbjct 1719175 AAAAAAAAGTTTGGGAAAAGAAACACTATCTGGCTGTTTGGTCCTTCCACAACGACCGGA 1719234 Query 1335 AAAACCAACATCGCGGAAGCCATCGCCCACGCCGTGCCCTTCTACGGCTGCGTAAACTGG 1394 || || ||| | || ||||||||| || || || || || || || || || | || Sbjct 1719235 AAGACAAACTTTGCAGAAGCCATCTTGCATGCTGTTCCATTTTATGGATGTGTTCATTGA 1719294 Query 1395 ACCAATGAGAACTTTCCCTTCAACGATTGCGTCGACAAGATGGTGATCTGGTGGGAGGAG 1454 |||||||| |||||||| ||| | |||||| | ||||| |||| Sbjct 1719295 ACCAATGAAAACTTTCCATTCTATGATTGCAT---CAAGA---------------AGGA- 1719335 Query 1455 GGCAAGATGACGGCCAAGGTCGTGGAGAGCGCCAAGGCCATTCTGGGCGGAAGCAAGGTG 1514 || ||||| || ||||| || ||| || |||| |||||| | ||||| || Sbjct 1719336 ---AAAATGACTGCTAAGGTTGTCGAGTCTGCAAAGGTCATTCTCGATGGAAGTCCTGTT 1719392 Query 1515 CGCGTGGACCAAAAGTGCAAGTCATCGGCCCAGATCGAACCCACTCCCGTGATCGTCACC 1574 | | ||||||||||||||||| || |||| || | || || ||||| || || Sbjct 1719393 TGTATTGACCAAAAGTGCAAGTCCTCTCAACAGACTGATCTGACACCAGTGATTGTGACT 1719452 Query 1575 TCCAACACCAACATGTGCGCCGTGATTGACGGGAACAGCACCACCTTCGAGCATCAGCAG 1634 || || || |||||||| || || || || || || | || ||||| ||||| ||| Sbjct 1719453 TCAAATACTAACATGTGTGCTGTCATGGATGGAAATTCAATAACATTCGAACATCAACAG 1719512 Query 1635 CCGCTGCAGGACCGGATGTTTGAATTTGAACTTACCCGCCGTTTGGACCATGACTTTGGG 1694 || || | || | || || ||||||||||| | ||| | || |||||||||||| Sbjct 1719513 CCATTGGAAGATCAAATATTCAAATTTGAACTTGTCTGCCAACTCGATCATGACTTTGGG 1719572 Query 1695 AAGGTCACCAAACAGGAAGTAAAGGACTTTTTCCGGTGGGC---TTCCGATCACGTGACT 1751 ||| ||| ||| || | || || || || ||||| || || | ||| | Sbjct 1719573 AAGACCACAAAAACAGAGATCAAAGAGTTCTTTGCCTGGGCAAAGGCCAATGA-GTG--T 1719629 Query 1752 GACGTGGCTCATGAGTTCTACGTCAGAAAGGGTGGA-GCTAAGAAACGCCCCGCCTCCAA 1810 || || | | |||||| | || || ||||||||| ||||||||| | ||||| || Sbjct 1719630 GATGTCACGCGTGAGTTTAATGTTAG-AAGGGTGGAGGCTAAGAAAAGATCCGCCCCCTC 1719688 Query 1811 TGACGCGGATGTAAGCGAGCCAAAACG 1837 || | | |||||||| | ||||||| Sbjct 1719689 TGCAGAGAATGTAAGCCTGTCAAAACG 1719715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15010085348035