Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_001829.1 Length=4767 Score E Sequences producing significant alignments: (Bits) Value seq73 156 1e-34 >seq73 Length=7004857 Score = 156 bits (172), Expect = 1e-34 Identities = 359/537 (67%), Gaps = 33/537 (6%) Strand=Plus/Plus Query 1333 AAAAGAAGTTCGGGAAGAGGAACACCATCTGGCTCTTTGGGCCGGCCACGACG---GGTA 1389 |||| ||||| ||||| || ||||| |||||||| ||||| || |||| ||| || | Sbjct 1719176 AAAAAAAGTTTGGGAAAAGAAACACTATCTGGCTGTTTGGTCCTTCCACAACGACCGGAA 1719235 Query 1390 AAACCAACATCGCGGAAGCCATCGCCCACGCCGTGCCCTTCTACGGCTGCGTGAACTGGA 1449 | || ||| | || ||||||||| || || || || || || || || || | || | Sbjct 1719236 AGACAAACTTTGCAGAAGCCATCTTGCATGCTGTTCCATTTTATGGATGTGTTCATTGAA 1719295 Query 1450 CCAATGAGAACTTTCCGTTCAACGATTGCGTCGACAAGATGGTGATCTGGTGGGAGGAGG 1509 ||||||| |||||||| ||| | |||||| || |||| |||| Sbjct 1719296 CCAATGAAAACTTTCCATTCTATGATTGCATC---AAGA---------------AGGA-- 1719335 Query 1510 GCAAGATGACGGCCAAGGTCGTAGAGAGCGCCAAGGCCATCCTGGGCGGAAGCAAGGTGC 1569 || ||||| || ||||| || ||| || |||| ||| || | ||||| || Sbjct 1719336 --AAAATGACTGCTAAGGTTGTCGAGTCTGCAAAGGTCATTCTCGATGGAAGTCCTGTTT 1719393 Query 1570 GCGTGGACCAAAAGTGCAAGTCATCGGCCCAGATCGACCCAACTCCCGTGATCGTCACCT 1629 | | ||||||||||||||||| || |||| || | || || ||||| || || | Sbjct 1719394 GTATTGACCAAAAGTGCAAGTCCTCTCAACAGACTGATCTGACACCAGTGATTGTGACTT 1719453 Query 1630 CCAACACCAACATGTGCGCGGTCATCGACGGAAACTCGACCACCTTCGAGCACCAACAAC 1689 | || || |||||||| || ||||| || ||||| || | || ||||| || ||||| | Sbjct 1719454 CAAATACTAACATGTGTGCTGTCATGGATGGAAATTCAATAACATTCGAACATCAACAGC 1719513 Query 1690 CACTCCAGGACCGGATGTTCAAGTTCGAGCTCACCAAGCGCCTGGAGCACGACTTTGGCA 1749 || | | || | || ||||| || || || | | || || || |||||||| | Sbjct 1719514 CATTGGAAGATCAAATATTCAAATTTGAACTTGTCTGCCAACTCGATCATGACTTTGGGA 1719573 Query 1750 AGGTCACCAAGCAGGAAGTCAAAGACTTTTTCCGGTGGGC---GTCAGATCACGTGACCG 1806 || ||| || || ||||||| || || ||||| | | || | ||| | Sbjct 1719574 AGACCACAAAAACAGAGATCAAAGAGTTCTTTGCCTGGGCAAAGGCCAATGA-GTG--TG 1719630 Query 1807 AGGTGACTCACGAGTTTTACGTCAGAAAGGGTGGA-GCTAGAAAGAGGCCCGCCCCC 1862 | || || | |||||| | || || ||||||||| |||| || || |||||||| Sbjct 1719631 ATGTCACGCGTGAGTTTAATGTTAG-AAGGGTGGAGGCTAAGAAAAGATCCGCCCCC 1719686 Score = 111 bits (122), Expect = 5e-21 Identities = 192/273 (70%), Gaps = 17/273 (6%) Strand=Plus/Plus Query 2887 CAAGGTGCCGATGGAGTGGGTAATGCCTCGGGTGATTGGCATTGCGATTCCACCTGGTCT 2946 || ||| ||||||||||||| | ||| ||| | ||||||||||||||||| ||| | Sbjct 1720698 CAGGGTTCCGATGGAGTGGGCGCTTCCTTGGGAAACTGGCATTGCGATTCCACGTGGG-T 1720756 Query 2947 GAGGGCCACGTCACGACCACCAGCACCAGAACCTGGGTCTTGCCCACCTACAACAACCAC 3006 | | | | |||| || | ||| | ||||||||| |||| |||||| |||||||| Sbjct 1720757 GGGTGAGA-GTCATCACAAAATCTACCGGTACCTGGGTCCTGCCAACCTACGACAACCAC 1720815 Query 3007 CTCTACAAG--------CGACTCGGAGAGAGCCTGCAGTCCA--ACACC---TACAACGG 3053 || ||||| | |||| | ||| | ||| | | | ||||| ||| | || Sbjct 1720816 CTGCACAAGGAAATCAACAACTCTG-GAGCGACTGGAAACAATGACACCCAGTACTATGG 1720874 Query 3054 ATTCTCCACCCCCTGGGGATACTTTGACTTCAACCGCTTCCACTGCCACTTCTCACCACG 3113 |||| |||| | | ||||| | |||||| | || || ||| ||||||| || || | Sbjct 1720875 ATTCAGCACCTG-TAGAGATACCTGGACTTCCATCGGTTTCACGGCCACTTTTCCCCTCA 1720933 Query 3114 TGACTGGCAGCGACTCATCAACAACAACTGGGG 3146 || ||||| | |||||||| ||||||||||| Sbjct 1720934 AGATTGGCAACATCTCATCAATAACAACTGGGG 1720966 Score = 93.3 bits (102), Expect = 1e-15 Identities = 203/303 (67%), Gaps = 1/303 (0%) Strand=Plus/Plus Query 2350 CCCAAGGCAAATCAACAACATCAGGACAACGCTCGGGGTCTTGTGCTTCCGGGTTACAAA 2409 || || || ||||||||| | || || ||| | | || | ||| |||| || |||||| Sbjct 1720139 CCAAAAGCTAATCAACAAAAACAAGAAAACACCAGAGGGCCTGTTGTTCCTGGATACAAA 1720198 Query 2410 TACCTCGGACCCGGCAACGGACTCGACAAGGGGGAACCCGTCAACGCAGCGGACGCGGCA 2469 || || ||||| || || || | || || || | || || ||| ||| || Sbjct 1720199 TATCTTGGACCACTTAATGGTCTAGGTAAAGGAGAGCTGGTTAATAGAGCAGACATGGTT 1720258 Query 2470 GCCCTCGAGCACGACAAGGCCTACGACCAGCAGCTCAAGGCCGGTGACAACCCCTACCTC 2529 ||| ||||| |||||||| || | || | || || | |||| || || || Sbjct 1720259 GCCAAAGAGCATGACAAGGCATATAATCAACTCCTTAACAGCTGTGATAATCCACGTCTA 1720318 Query 2530 AAGTACAACCACGCCGACGCGGAGTTCCAGCAGCGGCTTCAGGGCGACA-CATCGTTTGG 2588 | |||||||| || || || ||||| ||| || ||| | ||||| ||||| | || Sbjct 1720319 ACATACAACCATGCAGATGCTGAGTTTCAGAAGAAGCTCGCAGACGACAACATCGCTAGG 1720378 Query 2589 GGGCAACCTCGGCAGAGCAGTCTTCCAGGCCAAAAAGAGGGTTCTTGAACCTCTTGGTCT 2648 || ||||| || | ||| | ||||||||||| || | |||| ||||| ||| ||| Sbjct 1720379 TGGAAACCTTGGAAAAGCTATATTCCAGGCCAATAAATGAGTTCCCGAACCCTTTGCTCT 1720438 Query 2649 GGT 2651 ||| Sbjct 1720439 GGT 1720441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15141275605820