Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_002077.1 Length=4718 Score E Sequences producing significant alignments: (Bits) Value seq73 235 2e-58 >seq73 Length=7004857 Score = 235 bits (260), Expect = 2e-58 Identities = 484/715 (68%), Gaps = 30/715 (4%) Strand=Plus/Plus Query 1117 CCAGATCAAGGCCGCTCTGGACAATGCCGGCAAGATCATGGCGCTGACCAAATCCGCGCC 1176 |||||| || | || ||||| ||||| | ||||||||| ||||| ||| | || Sbjct 1718996 CCAGATTAAATCTGCACTGGAGAATGCATGTAAGATCATGAGTCTGACAAAAACAGCCAG 1719055 Query 1177 CGACTACCTGGTAGGCCCCGCTCCGCCCGCGGACATTAAAACCAACCGCATCTACCGCAT 1236 || || ||| || | | | | |||||||| ||||| || || ||| || Sbjct 1719056 TGATTATTTGGCCGGTAATGAACTGTCAAATGACATTAAGACCAATCGGATATACAAAAT 1719115 Query 1237 CCTGGAGCTGAACGGCTACGAACCTGCCTACGCCGGCTCCGT-CTTTCTCGGCTGG-GCC 1294 | || || || || ||||| ||||| || || || || || | | ||||| | | Sbjct 1719116 GTTTGAACTAAATGGATACGATCCTGCATATGCTGGAAGTGTGCTGTAT-GGCTGATGTC 1719174 Query 1295 CAGAAAAGGTTCGGGAAGCGCAACACCATCTGGCTGTTTGGGCCGGCCACCACG---GGC 1351 | |||| ||| ||||| | ||||| |||||||||||||| || |||| ||| || Sbjct 1719175 AAAAAAAAGTTTGGGAAAAGAAACACTATCTGGCTGTTTGGTCCTTCCACAACGACCGGA 1719234 Query 1352 AAGACCAACATCGCGGAAGCCATCGCCCACGCCGTGCCCTTCTACGGCTGCGTCAACTGG 1411 ||||| ||| | || ||||||||| || || || || || || || || || | || Sbjct 1719235 AAGACAAACTTTGCAGAAGCCATCTTGCATGCTGTTCCATTTTATGGATGTGTTCATTGA 1719294 Query 1412 ACCAATGAGAACTTTCCCTTCAATGATTGCGTCGACAAGATGGTGATCTGGTGGGAGGAG 1471 |||||||| |||||||| ||| |||||||| || |||| |||| Sbjct 1719295 ACCAATGAAAACTTTCCATTCTATGATTGCATC---AAGA---------------AGGA- 1719335 Query 1472 GGCAAGATGACGGCCAAGGTCGTGGAGTCCGCCAAGGCCATTCTCGGCGGCAGCAAGGTG 1531 || ||||| || ||||| || ||||| || |||| |||||||| || || || Sbjct 1719336 ---AAAATGACTGCTAAGGTTGTCGAGTCTGCAAAGGTCATTCTCGATGGAAGTCCTGTT 1719392 Query 1532 CGCGTGGACCAAAAGTGCAAGTCGTCCGCCCAGATCGACCCCACCCCCGTGATCGTCACC 1591 | | ||||||||||||||||| || |||| || | || || ||||| || || Sbjct 1719393 TGTATTGACCAAAAGTGCAAGTCCTCTCAACAGACTGATCTGACACCAGTGATTGTGACT 1719452 Query 1592 TCCAACACCAACATGTGCGCCGTGATTGACGGGAACAGCACCACCTTCGAGCACCAGCAG 1651 || || || |||||||| || || || || || || | || ||||| || || ||| Sbjct 1719453 TCAAATACTAACATGTGTGCTGTCATGGATGGAAATTCAATAACATTCGAACATCAACAG 1719512 Query 1652 CCGTTGCAGGACCGGATGTTCAAATTTGAACTCACCCGCCGTCTGGAGCATGACTTTGGC 1711 || ||| | || | || |||||||||||||| | ||| || || ||||||||||| Sbjct 1719513 CCATTGGAAGATCAAATATTCAAATTTGAACTTGTCTGCCAACTCGATCATGACTTTGGG 1719572 Query 1712 AAGGTGACAAAGCAGGAAGTCAAAGAGTTCTTCCGCTGGGCGCAGGATCACGTGACCGAG 1771 ||| ||||| || ||||||||||||| |||||| ||| | | | || Sbjct 1719573 AAGACCACAAAAACAGAGATCAAAGAGTTCTTTGCCTGGGCAAAGGCCAATGAGTGTGAT 1719632 Query 1772 GTGGCGCATGAGTTCTACGTCAGAAAGGGTGGA-GCCAACAAAAGACCCGCCCCC 1825 || ||| |||||| | || || ||||||||| || || |||||| |||||||| Sbjct 1719633 GTCACGCGTGAGTTTAATGTTAG-AAGGGTGGAGGCTAAGAAAAGATCCGCCCCC 1719686 Score = 179 bits (198), Expect = 1e-41 Identities = 377/563 (67%), Gaps = 17/563 (3%) Strand=Plus/Plus Query 2815 TGGGACCTACTACAATGGCTTCAGGCGGTGGCGCACCAATGGCAGACAATAACGAAGGCG 2874 ||| | ||| |||||||||| |||| | |||| ||||||| ||||||| | || Sbjct 1720645 TGGCATCTAGTACAATGGCTGCAGGTGCTGGCAGCCCAATGGGCGACAATATGCAGGGTT 1720704 Query 2875 CCGACGGAGTGGGTAATGCCTCAGGAAATTGGCATTGCGATTCCACATGGCTGGGCGACA 2934 |||| |||||||| | ||| ||||| ||||||||||||||||| ||| |||| || Sbjct 1720705 CCGATGGAGTGGGCGCTTCCTTGGGAAACTGGCATTGCGATTCCACGTGGGTGGGTGA-- 1720762 Query 2935 GAGTCATCACCANNNNNNNNNNNNNNNNNNNNNTGCCCACCTACAATAACCACCTCTACA 2994 |||||||||| | |||| |||||| | |||||||| ||| Sbjct 1720763 GAGTCATCACAAAATCTACCGGTACCTGGGTCCTGCCAACCTACGACAACCACCTGCACA 1720822 Query 2995 AGCAAATCTCCAGTGCTTCAACGGGGGCCAGCAACGACAACCACTACTTCGGCTACAGCA 3054 || ||||| || || | || | | ||| |||| ||| |||| || | ||||| Sbjct 1720823 AGGAAATCAACAACTCTGGAGCGACTGGAAACAATGACACCCAGTACTATGGATTCAGCA 1720882 Query 3055 CCCCCTGGGGGTATTTTGATTTCAACAGATTCCACTGCCACTTTTCACCACGTGACTGGC 3114 || | | | || | || ||| | | || ||| |||||||||| || | || |||| Sbjct 1720883 CCTG-TAGAGATACCTGGACTTCCATCGGTTTCACGGCCACTTTTCCCCTCAAGATTGGC 1720941 Query 3115 AGCGACTCATCAACAACAATTGGGGATTCCGGCCCAAGAGACTCAACTTCAAACTCTTCA 3174 | | |||||||| ||||| |||||| || || || || |||| | || ||| Sbjct 1720942 AACATCTCATCAATAACAACTGGGGA------CCAAAAAGGCTTGACTTTAG-CTTTTCC 1720994 Query 3175 ACATCCAAGTCAAGGAGGTCACGACGAATGATGGCGTCACAA---CCATCGCTAATAACC 3231 || | |||||| | || |||| ||| |||| | ||||| | ||||||||||| | Sbjct 1720995 ACGTTCAAGTCTAAGAAGTCATGACACATGA---CAACACAATGACTATCGCTAATAATC 1721051 Query 3232 TTACCAGCACGGTTCAAGTCTTCTCGGACTCGGAGTACCAGCTTCCGTACGTCCTC-GGC 3290 | || ||||| | || || || |||||||||| || ||||| |||||| | | || Sbjct 1721052 TCACAAGCACAATCCAGGTGTTTGCGGACTCGGACTATCAGCTACCGTACCACAACGGGG 1721111 Query 3291 TCTGCGCACCAGGGCTGCCTCCCTCCGTTCCCGGCGGACGTGTTCATGATTCCGCAATAC 3350 || | | | || || |||| ||| || || | || |||||| ||| || | Sbjct 1721112 AACGCACTCAAAGGAACACTGCCTCTGTTTCCAGCAGGTGTATTCATGGCTCCACAGCAT 1721171 Query 3351 GGCTACCTGACGCTCAACAATGG 3373 || || || || ||||||||||| Sbjct 1721172 GGATATCTAACTCTCAACAATGG 1721194 Score = 156 bits (172), Expect = 1e-34 Identities = 208/286 (73%), Gaps = 5/286 (2%) Strand=Plus/Plus Query 4032 GGCATGGTGTGGCAAGATAGAGACGTGTACCTGCAGGGTCCCATTTGGGCCAAAATTCCT 4091 || ||||| ||||||||| || || || | ||||| || |||||| | |||| |||| Sbjct 1722119 GGAATGGTATGGCAAGATCATGAAGTTCACTTCCAGGGACCAATTTGGTCTAAAAGTCCT 1722178 Query 4092 CACACAGATGGACACTTTCACCCGTCTCCTCTTATGGGCGGCTTTGGACTCAAGAACCCG 4151 ||||||||||| || |||| || || || | ||||| | |||||||| || | || Sbjct 1722179 CACACAGATGGGCATTTTCCTCCCTCACCGCCGATGGGTGTATTTGGACTGAAACATCC- 1722237 Query 4152 CCTCCTCAGATCCTCATCAAAAACACGCCTGTTCCTGCGAATCCTCCGGCGGAGTTTTCA 4211 || ||||| || || || ||||| || || |||||||| |||||||| | | | || Sbjct 1722238 CCACCTCAAATTCTAATAAAAAATACTCCAGTTCCTGCAAATCCTCCAAC--AACGTGCA 1722295 Query 4212 GCTACA--AAGTTTGCTTCATTCATCACCCAATACTCCACAGGACAAGTGAGTGTGGAAA 4269 | || ||| | || | |||||| || || |||||||||||||||| || |||| Sbjct 1722296 ACACCAGCAAGATCAACTCGTGCATCACTCAGTATTCCACAGGACAAGTGATGGTTGAAA 1722355 Query 4270 TTGAATGGGAGCTGCAGAAAGAAAACAGCAAGCGCTGGAATCCCGA 4315 | ||||||||||| || |||||| |||| | |||||||| || Sbjct 1722356 TCGAATGGGAGCTTCAAAAAGAATCATCCAAGAGATGGAATCCAGA 1722401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14984487248955