Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_005889.1 Length=4693 Score E Sequences producing significant alignments: (Bits) Value seq73 158 4e-35 >seq73 Length=7004857 Score = 158 bits (174), Expect = 4e-35 Identities = 277/401 (69%), Gaps = 2/401 (0%) Strand=Plus/Plus Query 2209 AGTAGTCATGTCTTTTGTTGACCACCCTCCAGATTGGTTGGAATCGATCGGCGACGGCTT 2268 |||||||||||||||||||| || |||||||||||||||||| | ||| | | | Sbjct 1720041 AGTAGTCATGTCTTTTGTTGCTCATCCTCCAGATTGGTTGGAAAAGGCTGGCCATGCACT 1720100 Query 2269 TCGTGA-ATTTCTCGGCCTTGAGGCGGGTCCCCCGAAACCCAAGGCCAATCAACAGAAGC 2327 | ||| ||| | |||||||| || || || | || || || |||||||| || | Sbjct 1720101 TGCTGAGTTTTTTTCATCTTGAGGCAGGACCTCCAGAGCCAAAAGCTAATCAACAAAAAC 1720160 Query 2328 AAGATAACGCTCGAGGTCTTGTGCTTCCTGGGTACAAGTATCTTGGTCCTGGGAACGGCC 2387 |||| ||| | |||| | ||| ||||||| ||||| |||||||| || || || | Sbjct 1720161 AAGAAAACACCAGAGGGCCTGTTGTTCCTGGATACAAATATCTTGGACCACTTAATGGTC 1720220 Query 2388 TTGATAAGGGCGATCCTGTCAATTTTGCTGACGAGGTTGCCCGAGAGCACGACCTCTCCT 2447 | | ||| || || | || ||| || ||| ||||||| |||||| ||| | | Sbjct 1720221 TAGGTAAAGGAGAGCTGGTTAATAGAGCAGACATGGTTGCCAAAGAGCATGACAAGGCAT 1720280 Query 2448 ACCAGAAACAGCTTGAGGCGGGCGATAACCCTTACCTCAAGTACAACCACGCGGACGCAG 2507 | | ||| ||| | | ||||| || || | |||||||| || || || | Sbjct 1720281 ATAATCAACTCCTTAACAGCTGTGATAATCCACGTCTAACATACAACCATGCAGATGCTG 1720340 Query 2508 AGTTTCAGGAGAAACTCGCTTCTGAC-ACTTCTTTTGGGGGAAACCTTGGGAAGGCTGTT 2566 |||||||| |||| ||||| ||| || || | || ||||||||||| || ||| | Sbjct 1720341 AGTTTCAGAAGAAGCTCGCAGACGACAACATCGCTAGGTGGAAACCTTGGAAAAGCTATA 1720400 Query 2567 TTCCAGGCTAAAAAGAGGATTCTCGAACCTCTTGGCCTGGT 2607 |||||||| || || | ||| |||||| ||| ||||| Sbjct 1720401 TTCCAGGCCAATAAATGAGTTCCCGAACCCTTTGCTCTGGT 1720441 Score = 154 bits (170), Expect = 4e-34 Identities = 476/734 (65%), Gaps = 39/734 (5%) Strand=Plus/Plus Query 1061 ATCACTTCCGAGAAGCAGTGGATTCAG---GAGAATCAGGAGAGCTACCTGTCCTTCAAC 1117 ||||| || || || || ||||| || |||| ||||| || ||| || ||| Sbjct 1718916 ATCACCTCAGAAAAACAATGGATACAACAAGAGAGCCAGGAAGATTATCTGAGCTACAAT 1718975 Query 1118 TCCACGGGAAACTCTCGGAGCCAGATTAAAGCCGCGCTTGACAACGCGTCAAAAATTATG 1177 | || |||| || |||||||||||||| | || || || || || | || || ||| Sbjct 1718976 GCAACTGGAATATCCAGGAGCCAGATTAAATCTGCACTGGAGAATGCATGTAAGATCATG 1719035 Query 1178 AGTCTGACCAAATCTGCCTCAGACTATCTCGTGGGACAG--ACTGTTCCAGAGGACATTT 1235 |||||||| ||| | ||| || ||| | | || | ||||| || | |||||| Sbjct 1719036 AGTCTGACAAAAACAGCCAGTGATTATTTGGCCGGTAATGAACTGT--CAAATGACATTA 1719093 Query 1236 CTGAAAACAGAATCTGGCAGATTTTTGATCTCAACGGCTACGACCCGGCATACGCGGGCT 1295 || | || | | || ||||| || || || ||||| || ||||| || || Sbjct 1719094 AGACCAATCGGATATACAAAATGTTTGAACTAAATGGATACGATCCTGCATATGCTGGAA 1719153 Query 1296 CTGTTCTCTACGGCTGGTG-CACTCGCGCCTTTGGAAAGAGGAACACCGTCTGGCTGTAT 1354 ||| || || ||||| || || ||||| || || ||||| ||||||||| | Sbjct 1719154 GTGTGCTGTATGGCTGATGTCAAAAAAAAGTTTGGGAAAAGAAACACTATCTGGCTGTTT 1719213 Query 1355 GGACC---CGCGACCACCGGAAAGACCAACATCGCGGAAGCCATCTCTCACACCGTGCCC 1411 || || | | || ||||||||||| ||| | || |||||||||| || | || || Sbjct 1719214 GGTCCTTCCACAACGACCGGAAAGACAAACTTTGCAGAAGCCATCTTGCATGCTGTTCCA 1719273 Query 1412 TTTTATGGCTGTGTGAACTGGACTAATGAGAACTTNNNNNNNNNNNNNNNNNNNGAAAAA 1471 |||||||| ||||| | || || ||||| ||||| Sbjct 1719274 TTTTATGGATGTGTTCATTGAACCAATGAAAACTTTCCATTCT----------------- 1719316 Query 1472 ATG-TTG-ATCTGGTGGGAGGAGGGAAAGATGACCAGCAAGGTGGTGGAACCCGCCAAGG 1529 ||| ||| ||| | || ||||| ||||| ||||| || || | || |||| Sbjct 1719317 ATGATTGCATC-------AAGAAGGAAAAATGACTGCTAAGGTTGTCGAGTCTGCAAAGG 1719369 Query 1530 CCATCTTgggggggTCTAGAGTACGAGTGGATCAAAAATGTAAATCCTCTGTACAAGTAG 1589 ||| | | || | || | | || ||||| || || |||||| ||| | Sbjct 1719370 TCATTCTCGATGGAAGTCCTGTTTGTATTGACCAAAAGTGCAAGTCCTCTCAACAGACTG 1719429 Query 1590 ACTCT-ACCCCGGTGATTATCACCTCCAATACTAACATGTGTGTGGTGGTGGATGGGAAC 1648 | ||| || || |||||| | || || |||||||||||||||| || ||||||| || Sbjct 1719430 A-TCTGACACCAGTGATTGTGACTTCAAATACTAACATGTGTGCTGTCATGGATGGAAAT 1719488 Query 1649 TCCACGACCTTTGAACACCAGCAGCCGCTGGAAGACCGCATGTTCAGATTTGAACTCATG 1708 || | || || ||||| || ||||| ||||||| | || |||| ||||||||| | Sbjct 1719489 TCAATAACATTCGAACATCAACAGCCATTGGAAGATCAAATATTCAAATTTGAACTTGTC 1719548 Query 1709 CGGCGGCTCCCGCCAGATTTTGGCAAGATTACCAAGCAGGAAGTCAAAGACTTTTTTGCT 1768 | | ||| | || ||||| |||| || || || ||||||| || ||||| Sbjct 1719549 TGCCAACTCGATCATGACTTTGGGAAGACCACAAAAACAGAGATCAAAGAGTTCTTTGCC 1719608 Query 1769 TGGGCAAAGGTCAA 1782 |||||||||| ||| Sbjct 1719609 TGGGCAAAGGCCAA 1719622 Score = 136 bits (150), Expect = 1e-28 Identities = 204/286 (71%), Gaps = 3/286 (1%) Strand=Plus/Plus Query 4025 GGAATGGTGTGGCAGGACAGAGACATTTACTACCAAGGGCCCATTTGGGCCAAAATTCCA 4084 |||||||| ||||| || || || ||| ||| || || |||||| | |||| ||| Sbjct 1722119 GGAATGGTATGGCAAGATCATGAAGTTCACTTCCAGGGACCAATTTGGTCTAAAAGTCCT 1722178 Query 4085 CACACGGATGGACACTTTCACCCGTCTCCTCTCATTGGCGGATTTGGACTGAAAAGCCCG 4144 ||||| ||||| || |||| || || || | || || | ||||||||||||| || Sbjct 1722179 CACACAGATGGGCATTTTCCTCCCTCACCGCCGATGGGTGTATTTGGACTGAAACATCC- 1722237 Query 4145 CCTCCACAAATATTCATCAAAAACACTCCTGTACCCGCCAATCCCGCAACGACCTTC-TC 4203 || || ||||| | || ||||| ||||| || || || ||||| |||| || | | | Sbjct 1722238 CCACCTCAAATTCTAATAAAAAATACTCCAGTTCCTGCAAATCCTCCAACAACGTGCAAC 1722297 Query 4204 TCCGGCCAGAATCAACAGCTTCATCACCCAGTACAGCACCGGACAGGTGGCTGTCAAAAT 4263 || || || |||||| | |||||| ||||| ||| ||||| ||| || |||| Sbjct 1722298 ACCAGCAAG-ATCAACTCGTGCATCACTCAGTATTCCACAGGACAAGTGATGGTTGAAAT 1722356 Query 4264 AGAATGGGAAATCCAGAAGGAGCGGTCCAAGAGATGGAACCCAGAG 4309 |||||||| | || || || |||||||||||||| |||||| Sbjct 1722357 CGAATGGGAGCTTCAAAAAGAATCATCCAAGAGATGGAATCCAGAG 1722402 Score = 96.9 bits (106), Expect = 1e-16 Identities = 189/275 (69%), Gaps = 17/275 (6%) Strand=Plus/Plus Query 2849 CAAGGTGCCGAGGGAGTGGGTAATGCCTCCGGTGATTGGCATTGCGATTCCACTTGG-TC 2907 || ||| |||| |||||||| | ||| || | ||||||||||||||||| ||| | Sbjct 1720698 CAGGGTTCCGATGGAGTGGGCGCTTCCTTGGGAAACTGGCATTGCGATTCCACGTGGGTG 1720757 Query 2908 AGAGAGCCACGTCACCACCACCTCAACCCGCACCTGGGTCCTGCCGACCTACAACAACCA 2967 | ||| |||| ||| | || ||| | |||||||||||||| |||||| ||||||| Sbjct 1720758 GGTGAGA---GTCATCACAAAATCTACCGGTACCTGGGTCCTGCCAACCTACGACAACCA 1720814 Query 2968 CCTGTACCTG-----CGGCTCGGCTCGAGCAAC----GCCAGCGACACC---TTCAACGG 3015 |||| || | | | || |||| || || |||||| | | | || Sbjct 1720815 CCTGCACAAGGAAATCAACAACTCTGGAGCGACTGGAAACAATGACACCCAGTACTATGG 1720874 Query 3016 ATTCTCCACCCCCTGGGGATACTTTGACTTTAACCGCTTCCACTGCCACTTCTCGCCAAG 3075 |||| || || | | ||||| | ||||| | || || ||| ||||||| || || Sbjct 1720875 ATTCAGCA-CCTGTAGAGATACCTGGACTTCCATCGGTTTCACGGCCACTTTTCCCCTCA 1720933 Query 3076 AGACTGGCAAAGGCTCATCAACAACCACTGGGGAC 3110 ||| |||||| |||||||| ||| ||||||||| Sbjct 1720934 AGATTGGCAACATCTCATCAATAACAACTGGGGAC 1720968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14904493189330