Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_006147.2 Length=5132 Score E Sequences producing significant alignments: (Bits) Value seq73 147 7e-32 >seq73 Length=7004857 Score = 147 bits (162), Expect = 7e-32 Identities = 285/411 (69%), Gaps = 21/411 (5%) Strand=Plus/Plus Query 3068 ATGGGCGAC--TCTGCAGGGGGTGCCGATGGAGTGGGTAATGCCTCAGGAAATTGGCATT 3125 ||||||||| | ||||||| | ||||||||||||| | ||| ||||| ||||||| Sbjct 1720683 ATGGGCGACAATATGCAGGG--TTCCGATGGAGTGGGCGCTTCCTTGGGAAACTGGCATT 1720740 Query 3126 GCGATTCCCAATGGCTGGGAGACACAGTCATTACCAAGACTACAAGAACCTGGGTCCTGC 3185 |||||||| ||| |||| | | |||||| || || |||| | ||||||||||||| Sbjct 1720741 GCGATTCCACGTGGGTGGGTG--AGAGTCATCACAAAATCTACCGGTACCTGGGTCCTGC 1720798 Query 3186 CAAGCTACAACAACCACATGTACCAAGCCATC-ACAA--GCGGAACAAACCCAGACTCAA 3242 ||| |||| |||||||| || || | | ||| |||| ||| | | | || ||| Sbjct 1720799 CAACCTACGACAACCACCTGCACAAGGAAATCAACAACTCTGGAGCGA--CTGGAAACAA 1720856 Query 3243 --ATACCCAATATGCTGGATACAGCACCCCCTGGGGGTACTTTGATTTCAACAGATTCCA 3300 | ||||| || ||||| ||||| || | | | ||| | || ||| | | || || Sbjct 1720857 TGACACCCAGTACTATGGATTCAGCA-CCTGTAGAGATACCTGGACTTCCATCGGTTTCA 1720915 Query 3301 CTGCCATTTCTCTCCAAGAGACTGGCAGAGACTCATCAACAACCATTGGGGGATTAGACC 3360 | |||| || || || ||| ||||| |||||||| ||| | |||| |||| Sbjct 1720916 CGGCCACTTTTCCCCTCAAGATTGGCAACATCTCATCAATAACAACTGGG------GACC 1720969 Query 3361 GAAAGCACTCAAATTCAAGATATTCAATGTGCAAGTTAAAGAAGTCACGACGCAAGACCA 3420 ||| || | || || | ||| | || ||||| ||||||||| ||| || ||| | Sbjct 1720970 AAAAAGGCTTGACTT-TAGCTTTTCCACGTTCAAGTCTAAGAAGTCATGACACATGACAA 1721028 Query 3421 GACAAAGACTATTGCTAACAACCTTACCTCTACAATCCAGATATTCACGGA 3471 |||| |||||| ||||| || || || ||||||||| | || |||| Sbjct 1721029 CACAATGACTATCGCTAATAATCTCACAAGCACAATCCAGGTGTTTGCGGA 1721079 Score = 95.1 bits (104), Expect = 4e-16 Identities = 201/290 (69%), Gaps = 9/290 (3%) Strand=Plus/Plus Query 4247 GGCATGGTCTGGCA-GAACAGAGATATTTACCTGCAGGGTCCTATATGGGCTAAAATACC 4305 || ||||| ||||| || || || || || | ||||| || || ||| |||||| || Sbjct 1722119 GGAATGGTATGGCAAGATCAT-GAAGTTCACTTCCAGGGACCAATTTGGTCTAAAAGTCC 1722177 Query 4306 CAAAACAGATGGGAAACCCCATCCTTCTCCAAACCTGGGAGGTTTTGGTCTCCATAATCC 4365 | ||||||||| | | ||| || || |||| | ||||| || | |||| Sbjct 1722178 TCACACAGATGGGCATTTTCCTCCCTCACCGCCGATGGGTGTATTTGGACTGAAACATCC 1722237 Query 4366 ACCTCCCCAGGTCTTTATTAAAAATACTCCTGTTCCTGCAGATCCTCCACTAGAGTATGT 4425 || || || | | || ||||||||||| ||||||||| |||||||| | || | Sbjct 1722238 -CCACCTCAAATTCTAATAAAAAATACTCCAGTTCCTGCAAATCCTCCAACAACGT--GC 1722294 Query 4426 AA-ATCAG-AAGTGGAATTCTTACATTACACAGTATTCAACAGGGCA-GTGTACTGTAGA 4482 || | ||| ||| || || | ||| || |||||||| ||||| || ||| | || || Sbjct 1722295 AACACCAGCAAGATCAACTCGTGCATCACTCAGTATTCCACAGGACAAGTG-ATGGTTGA 1722353 Query 4483 AATGGTCTGGGAACTCAGAAAAGAAAACTCCAAGAGATGGAACCCTGAGA 4532 ||| | ||||| || ||||||| |||||||||||||| || |||| Sbjct 1722354 AATCGAATGGGAGCTTCAAAAAGAATCATCCAAGAGATGGAATCCAGAGA 1722403 Score = 78.8 bits (86), Expect = 3e-11 Identities = 195/290 (67%), Gaps = 12/290 (4%) Strand=Plus/Plus Query 1379 CTAACAAAAACTGCCACAGACTATTTGATTGGAAAAGACC---CAGTTCTGGACATTACT 1435 || |||||||| |||| || |||||| || || || | || | ||||||| Sbjct 1719039 CTGACAAAAACAGCCAGTGATTATTTGGCCGGTAATGAACTGTCAAAT---GACATTAAG 1719095 Query 1436 AAAAATCGGATCTATCAAAT-TCTGAAGTTGAATAACTATAACCCTCAATATGTAGGGAG 1494 | |||||||| || |||| | |||| | ||| || | ||| ||||| || || Sbjct 1719096 ACCAATCGGATATACAAAATGTTTGAACTA-AATGGATACGATCCTGCATATGCTGGAAG 1719154 Query 1495 CGTCCTATGCGGATGG-GTGAAAAGAGAATTCAACAAAAGAAATGCCATATGGCTCTACG 1553 || || | || || || |||| | | || |||||||| | || ||||| | | Sbjct 1719155 TGTGCTGTATGGCTGATGTCAAAAAAAAGTTTGGGAAAAGAAACACTATCTGGCTGTTTG 1719214 Query 1554 GACCTGCGACCAC---CGGAAAGACCAACATAGCCGAGGCTATTGCCCATGCTGTACCCT 1610 | ||| | || || ||||||||| ||| | || || || || |||||||| || | Sbjct 1719215 GTCCTTCCACAACGACCGGAAAGACAAACTTTGCAGAAGCCATCTTGCATGCTGTTCCAT 1719274 Query 1611 TCTATGGCTGTGTTAACTGGACTAATGAGAACTTCCCATTTAATGACTGC 1660 | ||||| |||||| | || || ||||| ||||| ||||| |||| ||| Sbjct 1719275 TTTATGGATGTGTTCATTGAACCAATGAAAACTTTCCATTCTATGATTGC 1719324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16309188876345