Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_006152.1 Length=4642 Score E Sequences producing significant alignments: (Bits) Value seq73 221 4e-54 >seq73 Length=7004857 Score = 221 bits (244), Expect = 4e-54 Identities = 338/477 (71%), Gaps = 12/477 (3%) Strand=Plus/Plus Query 2760 CCTCAAGTTTGGGAGCTGATACAATGTCTGCGGGAGGTGGCGGCCCATTGGGCGACAATA 2819 |||||| ||||| | || ||||||| |||| || | |||| ||||| |||||||||||| Sbjct 1720636 CCTCAAATTTGGCATCTAGTACAATGGCTGCAGGTGCTGGCAGCCCAATGGGCGACAATA 1720695 Query 2820 ACCAAGGTGCCGATGGAGTGGGCAATGCCTCGGGAGATTGGCATTGCGATTCCACGTGGA 2879 || ||| |||||||||||||| | ||| |||| | ||||||||||||||||||||| Sbjct 1720696 TGCAGGGTTCCGATGGAGTGGGCGCTTCCTTGGGAAACTGGCATTGCGATTCCACGTGGG 1720755 Query 2880 TGGGGGACAGAGTCGTCACCAAGTCCACCCGAACCTGGGTGCTGCCCAGCTACAACAACC 2939 |||| | |||||| |||| || || ||| | |||||||| ||||| | |||| |||||| Sbjct 1720756 TGGGTG--AGAGTCATCACAAAATCTACCGGTACCTGGGTCCTGCCAACCTACGACAACC 1720813 Query 2940 ACCAGTACCGAGAGATCAAAAGCGGCTCCGTCGAC-GGAAGCAACGCCAACGCCTACTTT 2998 ||| | || || ||||| | | || |||| |||| ||| | || | |||| | Sbjct 1720814 ACCTGCACAAGGAAATCAACAAC-TCTGGAGCGACTGGAAACAATGACACCCAGTACTAT 1720872 Query 2999 GGATACAGCACCCCCTGGGGGTACTTTGACTTTAACCGCTTCCACAGCCACTGGAGCCCC 3058 |||| ||||| || | | | ||| | ||||| | || || ||| |||||| ||| Sbjct 1720873 GGATTCAGCA-CCTGTAGAGATACCTGGACTTCCATCGGTTTCACGGCCACTTTTCCCCT 1720931 Query 3059 CGAGACTGGCAAAGACTCATCAACAACTACTGGGGCTTCAGACCCCGGTCCCTCAGAGTC 3118 | ||| |||||| |||||||| ||| |||||| |||| || || | Sbjct 1720932 CAAGATTGGCAACATCTCATCAATAACAACTGGG------GACCAAAAAGGCT-TGACTT 1720984 Query 3119 AAAATCTTCAACATTCAAGTCAAAGAGGTCACGGTGCAGGACTCCACCACNNNNATCGCC 3178 | | ||| || |||||||| |||| |||| | || ||| ||| | ||||| Sbjct 1720985 TAGCTTTTCCACGTTCAAGTCTAAGAAGTCATGACACATGACAACACAATGACTATCGCT 1721044 Query 3179 AACAACCTCACCTCCACCGTCCAAGTGTTTACGGACGACGACTACCAGCTGCCCTAC 3235 || || ||||| ||| |||| |||||| ||||| ||||| ||||| || ||| Sbjct 1721045 AATAATCTCACAAGCACAATCCAGGTGTTTGCGGACTCGGACTATCAGCTACCGTAC 1721101 Score = 188 bits (208), Expect = 2e-44 Identities = 284/401 (71%), Gaps = 2/401 (0%) Strand=Plus/Plus Query 2200 AGTAGTCATGTCTTTTGTTGATCACCCTCCAGATTGGTTGGAAGAAGTTGGTGAAGGTCT 2259 |||||||||||||||||||| ||| |||||||||||||||||| | | ||| | | || Sbjct 1720041 AGTAGTCATGTCTTTTGTTGCTCATCCTCCAGATTGGTTGGAAAAGGCTGGCCATGCACT 1720100 Query 2260 TCGCGAG-TTTTTGGGCCTTGAAGCGGGCCCACCGAAACCAAAACCCAATCAGCAGCATC 2318 | ||| ||||| ||||| || || || || | |||||| | ||||| || | | Sbjct 1720101 TGCTGAGTTTTTTTCATCTTGAGGCAGGACCTCCAGAGCCAAAAGCTAATCAACAAAAAC 1720160 Query 2319 AAGATCAAGCCCGTGGTCTTGTGCTGCCTGGTTATAACTATCTCGGACCCGGAAACGGTC 2378 |||| | || | || | ||| | ||||| || || ||||| ||||| || |||| Sbjct 1720161 AAGAAAACACCAGAGGGCCTGTTGTTCCTGGATACAAATATCTTGGACCACTTAATGGTC 1720220 Query 2379 TCGATCGAGGAGAGCCTGTCAACAGGGCAGACGAGGTCGCGCGAGAGCACGACATCTCGT 2438 | | | |||||||| || || || |||||| ||| || |||||| |||| | | Sbjct 1720221 TAGGTAAAGGAGAGCTGGTTAATAGAGCAGACATGGTTGCCAAAGAGCATGACAAGGCAT 1720280 Query 2439 ACAACGAGCAGCTTGAGGCGGGAGACAACCCCTACCTCAAGTACAACCACGCGGACGCCG 2498 | || | | ||| | | || || || || | |||||||| || || || | Sbjct 1720281 ATAATCAACTCCTTAACAGCTGTGATAATCCACGTCTAACATACAACCATGCAGATGCTG 1720340 Query 2499 AGTTTCAGGAGAAGCTCGCCGACGAC-ACATCCTTCGGGGGAAACCTCGGAAAGGCAGTC 2557 |||||||| |||||||||| |||||| ||||| | || |||||||| ||||| || | Sbjct 1720341 AGTTTCAGAAGAAGCTCGCAGACGACAACATCGCTAGGTGGAAACCTTGGAAAAGCTATA 1720400 Query 2558 TTTCAGGCCAAGAAAAGGGTTCTCGAACCTTTTGGCCTGGT 2598 || |||||||| ||| | |||| |||||| |||| ||||| Sbjct 1720401 TTCCAGGCCAATAAATGAGTTCCCGAACCCTTTGCTCTGGT 1720441 Score = 134 bits (148), Expect = 4e-28 Identities = 374/570 (66%), Gaps = 38/570 (7%) Strand=Plus/Plus Query 1245 AAATTTTTGAGATGAATGGCTACGACCCGGCCTACGCGGGATCCATCCTCTACGGCTGGT 1304 |||| ||||| | ||||| ||||| || || || || ||| | || || ||||| | Sbjct 1719112 AAATGTTTGAACTAAATGGATACGATCCTGCATATGCTGGAAGTGTGCTGTATGGCTGAT 1719171 Query 1305 GTCAGCGCTCC-TTCAACAAGAGGAACACCGTCTGGCTCTACGGACCCGCCAC---GACC 1360 |||| || || || ||||| ||||||| | || || |||| |||| Sbjct 1719172 GTCAAAAAAAAGTTTGGGAAAAGAAACACTATCTGGCTGTTTGGTCCTTCCACAACGACC 1719231 Query 1361 GGCAAGACCAACATCGCGGAGGCCATCGCCCACACTGTGCCCTTTTACGGCTGCGTGAAC 1420 || ||||| ||| | || || |||||| || |||| || ||||| || || || | Sbjct 1719232 GGAAAGACAAACTTTGCAGAAGCCATCTTGCATGCTGTTCCATTTTATGGATGTGTTCAT 1719291 Query 1421 TGGACCAATGAAAACTTTCCCTTTAATGACTGTGTGGACAAAATGCTCATTTGGTGGGAG 1480 || ||||||||||||||||| || |||| || | ||| Sbjct 1719292 TGAACCAATGAAAACTTTCCATTCTATGATTGCAT---CAA------------------- 1719329 Query 1481 GAGGGAAAGATGACCAACAAGGTGGTTGAATCCGCCAAGGCCATCCTGGGGGGCTCAAAG 1540 || ||||| ||||| ||||| || || || || |||| ||| || | || ||| Sbjct 1719330 GAAGGAAAAATGACTGCTAAGGTTGTCGAGTCTGCAAAGGTCATTCTCGATGG----AAG 1719385 Query 1541 ----GTGCGGGTCGATCAGAAATGTAAATCCTCTGTTCAAATTGATTCTACCCCTGTCAT 1596 || | | || || || || || |||||| || | |||| || || || || Sbjct 1719386 TCCTGTTTGTATTGACCAAAAGTGCAAGTCCTCTCAACAGACTGATCTGACACCAGTGAT 1719445 Query 1597 TGTAACTTCCAATACAAACATGTGTGTGGTGGTGGATGGGAATTCCACGACCTTTGAACA 1656 ||| ||||| ||||| |||||||||| || ||||||| ||||| | || || ||||| Sbjct 1719446 TGTGACTTCAAATACTAACATGTGTGCTGTCATGGATGGAAATTCAATAACATTCGAACA 1719505 Query 1657 CCAGCAGCCGCTGGAGGACCGCATGTTCAAATTTGAAC-TGACTAAGCGGCTCCCGCCAG 1715 || ||||| |||| || | || ||||||||||||| || || | ||| | | Sbjct 1719506 TCAACAGCCATTGGAAGATCAAATATTCAAATTTGAACTTGTCT-GCCAACTCGATCATG 1719564 Query 1716 ATTTTGGCAAGATTACTAAGCAGGAAGTCAAGGACTTTTTTGCTTGGGCAAAGGTCAATC 1775 | ||||| |||| || || || |||| || || ||||| |||||||||| |||| Sbjct 1719565 ACTTTGGGAAGACCACAAAAACAGAGATCAAAGAGTTCTTTGCCTGGGCAAAGGCCAATG 1719624 Query 1776 AG-GTGCCGGTGACTCACGAGTTTAAAGTT 1804 || ||| || || | |||||||| ||| Sbjct 1719625 AGTGTG-ATGTCACGCGTGAGTTTAATGTT 1719653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14741305307695