Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_006260.1 Length=4721 Score E Sequences producing significant alignments: (Bits) Value seq73 242 1e-60 >seq73 Length=7004857 Score = 242 bits (268), Expect = 1e-60 Identities = 405/581 (70%), Gaps = 17/581 (3%) Strand=Plus/Plus Query 2799 CAGCAGCGCCCTCTAGTGTGGGATCTGGTACAGTGGCTGCAGGCGGTGGCGCACCAATGG 2858 ||| || | |||| | | ||| |||| ||||| |||||||||| | |||| ||||||| Sbjct 1720627 CAGTAGTGTCCTCAAATTTGGCATCTAGTACAATGGCTGCAGGTGCTGGCAGCCCAATGG 1720686 Query 2859 CAGACAATAACGAAGGTGCCGACGGAGTGGGTAATGCCTCAGGAAATTGGCATTGCGATT 2918 ||||||| | ||| |||| |||||||| | ||| ||||| ||||||||||||| Sbjct 1720687 GCGACAATATGCAGGGTTCCGATGGAGTGGGCGCTTCCTTGGGAAACTGGCATTGCGATT 1720746 Query 2919 CCACATGGCTGGGCGACAGAGTCATTACCACCAGCACCCGAACCTGGGCCCTGCCCACCT 2978 |||| ||| |||| | |||||||| || | ||| | ||||||| |||||| |||| Sbjct 1720747 CCACGTGGGTGGGTG--AGAGTCATCACAAAATCTACCGGTACCTGGGTCCTGCCAACCT 1720804 Query 2979 ACAACAACCACCTCTACAAGCAAATCTCCAGTGAAACTGCAG---GTAGTACCAACGACA 3035 || |||||||||| ||||| ||||| || | ||| || | | | ||| |||| Sbjct 1720805 ACGACAACCACCTGCACAAGGAAATCAACA---ACTCTGGAGCGACTGGAAACAATGACA 1720861 Query 3036 ACACCTACTTCGGCTACAGCACCCCCTGGGGGTATTTTGACTTTAACAGATTCCACTGCC 3095 | |||| || | ||||| || | | | || | ||||| | | || ||| ||| Sbjct 1720862 CCCAGTACTATGGATTCAGCA-CCTGTAGAGATACCTGGACTTCCATCGGTTTCACGGCC 1720920 Query 3096 ACTTCTCACCACGTGACTGGCAGCGACTCATCAACAACAACTGGGGATTCCGGCCCAAGA 3155 |||| || || | || ||||| | |||||||| |||||||||||| |||| | Sbjct 1720921 ACTTTTCCCCTCAAGATTGGCAACATCTCATCAATAACAACTGGGGA-------CCAAAA 1720973 Query 3156 AGCTGCGGTTCAAGCTCTTCAACATCCAGGTCAAGGAGGTCACGACGAATGACGGCGTTA 3215 || | | |||| ||| || | || ||| | || |||| ||| ||||| | | Sbjct 1720974 AGGCTTGACTTTAGCTTTTCCACGTTCAAGTCTAAGAAGTCATGACACATGACAACACAA 1721033 Query 3216 CGACCATCGCTAATAACCTTACCAGCACGATTCAGGTATTCTCGGACTCGGAATACCAGC 3275 ||| ||||||||||| || || ||||| || ||||| || |||||||||| || |||| Sbjct 1721034 TGACTATCGCTAATAATCTCACAAGCACAATCCAGGTGTTTGCGGACTCGGACTATCAGC 1721093 Query 3276 TGCCGTACGTCCTC-GGCTCTGCGCACCAGGGCTGCCTGCCTCCGTTCCCGGCGGACGTC 3334 | |||||| | | || || | | | || ||||||| ||| || || | || Sbjct 1721094 TACCGTACCACAACGGGGAACGCACTCAAAGGAACACTGCCTCTGTTTCCAGCAGGTGTA 1721153 Query 3335 TTCATGATTCCTCAGTACGGCTACCTGACTCTCAACAATGG 3375 |||||| ||| ||| | || || || |||||||||||||| Sbjct 1721154 TTCATGGCTCCACAGCATGGATATCTAACTCTCAACAATGG 1721194 Score = 223 bits (246), Expect = 1e-54 Identities = 492/733 (67%), Gaps = 30/733 (4%) Strand=Plus/Plus Query 1116 CCAGATCAAGGCCGCGCTGGACAATGCCGGCAAGATCATGGCGCTGACCAAATCCGCGCC 1175 |||||| || | || ||||| ||||| | ||||||||| ||||| ||| | || Sbjct 1718996 CCAGATTAAATCTGCACTGGAGAATGCATGTAAGATCATGAGTCTGACAAAAACAGCCAG 1719055 Query 1176 CGACTACCTGGTGGGGCCCTCGCTGCCCGCGGACATTAAAACCAACCGCATCTACCGCAT 1235 || || ||| || ||| | |||||||| ||||| || || ||| || Sbjct 1719056 TGATTATTTGGCCGGTAATGAACTGTCAAATGACATTAAGACCAATCGGATATACAAAAT 1719115 Query 1236 CCTGGAGCTGAACGGGTACGATCCTGCCTACGCCGGCTCCGT-CTTTCTCGGCTGG-GCC 1293 | || || || || ||||||||||| || || || || || | | ||||| | | Sbjct 1719116 GTTTGAACTAAATGGATACGATCCTGCATATGCTGGAAGTGTGCTGTAT-GGCTGATGTC 1719174 Query 1294 CAGAAAAAGTTCGGGAAGCGCAACACCATCTGGCTGTTTGGGCCCGCCACCAC---CGGC 1350 | |||||||| ||||| | ||||| |||||||||||||| || |||| || ||| Sbjct 1719175 AAAAAAAAGTTTGGGAAAAGAAACACTATCTGGCTGTTTGGTCCTTCCACAACGACCGGA 1719234 Query 1351 AAGACCAACATTGCGGAAGCCATCGCCCACGCCGTGCCCTTCTACGGCTGCGTCAACTGG 1410 ||||| ||| |||| ||||||||| || || || || || || || || || | || Sbjct 1719235 AAGACAAACTTTGCAGAAGCCATCTTGCATGCTGTTCCATTTTATGGATGTGTTCATTGA 1719294 Query 1411 ACCAATGAGAACTTTCCCTTCAACGATTGCGTCGACAAGATGGTGATCTGGTGGGAGGAG 1470 |||||||| |||||||| ||| | |||||| || |||| |||| Sbjct 1719295 ACCAATGAAAACTTTCCATTCTATGATTGCATC---AAGA---------------AGGA- 1719335 Query 1471 GGCAAGATGACGGCCAAGGTCGTGGAGTCCGCCAAGGCCATTCTCGGCGGCAGCAAGGTG 1530 || ||||| || ||||| || ||||| || |||| |||||||| || || || Sbjct 1719336 ---AAAATGACTGCTAAGGTTGTCGAGTCTGCAAAGGTCATTCTCGATGGAAGTCCTGTT 1719392 Query 1531 CGCGTGGACCAAAAGTGCAAGTCGTCCGCCCAGATCGACCCCACCCCCGTGATCGTCACC 1590 | | ||||||||||||||||| || |||| || | || || ||||| || || Sbjct 1719393 TGTATTGACCAAAAGTGCAAGTCCTCTCAACAGACTGATCTGACACCAGTGATTGTGACT 1719452 Query 1591 TCCAACACCAACATGTGCGCCGTGATTGACGGGAACAGCACCACCTTCGAGCACCAGCAG 1650 || || || |||||||| || || || || || || | || ||||| || || ||| Sbjct 1719453 TCAAATACTAACATGTGTGCTGTCATGGATGGAAATTCAATAACATTCGAACATCAACAG 1719512 Query 1651 CCGTTGCAGGACCGGATGTTCAAATTTGAACTCACCCGCCGTCTGGAGCACGACTTTGGC 1710 || ||| | || | || |||||||||||||| | ||| || || || |||||||| Sbjct 1719513 CCATTGGAAGATCAAATATTCAAATTTGAACTTGTCTGCCAACTCGATCATGACTTTGGG 1719572 Query 1711 AAGGTGACGAAGCAGGAAGTCAAAGAGTTCTTCCGCTGGGCCAGTGATCACGTGACCGAG 1770 ||| || || || ||||||||||||| |||||| | | | | | || Sbjct 1719573 AAGACCACAAAAACAGAGATCAAAGAGTTCTTTGCCTGGGCAAAGGCCAATGAGTGTGAT 1719632 Query 1771 GTGGCGCATGAGTTCTACGTCAGAAAGGGCGGA-GCCAGCAAAAGACCCGCCCCCGATGA 1829 || ||| |||||| | || || ||||| ||| || | |||||| |||||||| || Sbjct 1719633 GTCACGCGTGAGTTTAATGTTAG-AAGGGTGGAGGCTAAGAAAAGATCCGCCCCCTCTGC 1719691 Query 1830 CGCGGATATAAGC 1842 | | || ||||| Sbjct 1719692 AGAGAATGTAAGC 1719704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14994086536110