Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_006263.1 Length=4682 Score E Sequences producing significant alignments: (Bits) Value seq73 196 1e-46 >seq73 Length=7004857 Score = 196 bits (216), Expect = 1e-46 Identities = 322/455 (71%), Gaps = 17/455 (4%) Strand=Plus/Plus Query 2862 ATGGCTGAAGGAGGTGGCGGTCCAATGGGCGATGCAGGCCAAGGTGCCGACGGAGTGGGC 2921 ||||||| ||| | |||| | ||||||||||| || ||| |||| ||||||||| Sbjct 1720659 ATGGCTGCAGGTGCTGGCAGCCCAATGGGCGACAATATGCAGGGTTCCGATGGAGTGGGC 1720718 Query 2922 AATTCCTCGGGAAATTGGCATTGCGATTCCCAATGGCTGGACAACGGAGTCGTTACCCGA 2981 ||||| |||||| ||||||||||||||| ||| ||| | ||||| | || | Sbjct 1720719 GCTTCCTTGGGAAACTGGCATTGCGATTCCACGTGGGTGGGTGA--GAGTCATCACAAAA 1720776 Query 2982 ACCACTCGAACCTGGGTCCTGCCCAGCTACAACAACCACTTGTACAAGCGGATCCAAGGA 3041 | || | |||||||||||||| | |||| |||||||| || ||||| ||| || | Sbjct 1720777 TCTACCGGTACCTGGGTCCTGCCAACCTACGACAACCACCTGCACAAGGAAATC-AACAA 1720835 Query 3042 C-CGGGAGGAACCGACCCCAACAATA---AATTCTTTGGATTCAGCACCCCCTGGGGGTA 3097 | | |||| || | ||| | | | | || ||||||||||||| | | | || Sbjct 1720836 CTCTGGAGCGACTGGAAACAATGACACCCAGTACTATGGATTCAGCACCTG-TAGAGATA 1720894 Query 3098 CTTTGACTACAACCGATTCCACTGCCACTTCTCCCCCCGAGACTGGCAACGACTCATCAA 3157 | | |||| | | || || ||| ||||||| ||||| | ||| ||||||| |||||||| Sbjct 1720895 CCTGGACTTCCATCGGTTTCACGGCCACTTTTCCCCTCAAGATTGGCAACATCTCATCAA 1720954 Query 3158 CAACAACTGGGGCATCCGACCCAAAGCGATGCGCTTTAGACTCTTTAACATCCAGGTTAA 3217 |||||||||| |||| ||| | | |||||| || || || | || || | Sbjct 1720955 TAACAACTGGG------GACCAAAAAGGCTTGACTTTAG-CTTTTCCACGTTCAAGTCTA 1721007 Query 3218 AGAAGTCACTGTC-CAAGACTCCAACACCACCATCGCCAACAACCTCACCAGCACGGTCC 3276 |||||||| || | || ||| || | || ||||| || || ||||| ||||| ||| Sbjct 1721008 AGAAGTCA-TGACACATGACAACACAATGACTATCGCTAATAATCTCACAAGCACAATCC 1721066 Query 3277 AAGTCTTTGCGGACAAGGACTACCAGCTGCCGTAC 3311 | || ||||||||| |||||| ||||| |||||| Sbjct 1721067 AGGTGTTTGCGGACTCGGACTATCAGCTACCGTAC 1721101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14869295803095