Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_014468.1 Length=4286 Score E Sequences producing significant alignments: (Bits) Value seq73 199 1e-47 >seq73 Length=7004857 Score = 199 bits (220), Expect = 1e-47 Identities = 383/558 (69%), Gaps = 20/558 (4%) Strand=Plus/Plus Query 2618 ATATGGCATCTGCTGAGGTGGCTGCGGGTGGTGGCGGACCAGTGGGCGACGATGCACAAG 2677 || |||||||| | ||||||| |||| |||| | ||| |||||||| || || | Sbjct 1720642 ATTTGGCATCTAGTACAATGGCTGCAGGTGCTGGCAGCCCAATGGGCGACAATATGCAGG 1720701 Query 2678 GTGCCGATGGAGTGGGTAATGCCTCAGGAAATTGGCATTACGATTCCGTTTGGATGGACG 2737 || ||||||||||||| | ||| ||||| ||||||| ||||||| ||| ||| | Sbjct 1720702 GTTCCGATGGAGTGGGCGCTTCCTTGGGAAACTGGCATTGCGATTCCACGTGGGTGG--G 1720759 Query 2738 GCGCTGTCATCACCAAGTCCACCCGAACCTGGAGCCTGCCCGCCTACAACAACCACCTCT 2797 |||||||| || || ||| | |||||| |||||| ||||| |||||||||| Sbjct 1720760 TGAGAGTCATCACAAAATCTACCGGTACCTGGGTCCTGCCAACCTACGACAACCACCTGC 1720819 Query 2798 ACCGCCAGAT---CCAGTCCAGCGGCACCGGAGAC---GGCAC---GTACTTTGGTTACA 2848 || | || | | || | | || ||| || | ||| ||||| ||| | || Sbjct 1720820 ACAAGGAAATCAACAACTCTGGAGCGACTGGAAACAATGACACCCAGTACTATGGATTCA 1720879 Query 2849 GCACGCCTTGGGGATACTTCGATTTCAATCGATTCCACTGCCACTTTTCTCCCAGGGACT 2908 |||| | | | ||||| | || ||| |||| || ||| |||||||||| || || | Sbjct 1720880 GCAC-CTGTAGAGATACCTGGACTTCCATCGGTTTCACGGCCACTTTTCCCCTCAAGATT 1720938 Query 2909 GGCAGCGGCTCATCAACAACCACTGGGGCATCCGCCCCAAGCGGCTCCACTTTAAGCTCT 2968 |||| | |||||||| ||| |||||| | || || |||| ||||| |||| | Sbjct 1720939 GGCAACATCTCATCAATAACAACTGGG------GACCAAAAAGGCTTGACTTT-AGCTTT 1720991 Query 2969 TCAACATCCAGGTCAAGGAGGTCACGACGACCGACGGCACCACGACCATCGCCAACAACC 3028 || || | || ||| | || |||| ||| ||| ||| | ||| ||||| || || | Sbjct 1720992 TCCACGTTCAAGTCTAAGAAGTCATGACACATGACAACACAATGACTATCGCTAATAATC 1721051 Query 3029 TCACCAGCACCATACAGGTCTTTGCGGACACGGAGTACCAGCTCCCGTACGTGCTC-GGC 3087 |||| ||||| || ||||| ||||||||| |||| || ||||| |||||| | || Sbjct 1721052 TCACAAGCACAATCCAGGTGTTTGCGGACTCGGACTATCAGCTACCGTACCACAACGGGG 1721111 Query 3088 AACGCCCACGAGGGCTGCCTGCCGCCGTTCCCGGCGGACGTCTTCATGCTGCCGCAGTAC 3147 ||||| | | | || ||||| | ||| || || | || |||||| || ||| | Sbjct 1721112 AACGCACTCAAAGGAACACTGCCTCTGTTTCCAGCAGGTGTATTCATGGCTCCACAGCAT 1721171 Query 3148 GCGTACCTGACGCTCAAC 3165 | || || || |||||| Sbjct 1721172 GGATATCTAACTCTCAAC 1721189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 13602189898635