Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_027429.1 Length=4590 Score E Sequences producing significant alignments: (Bits) Value seq73 140 9e-30 >seq73 Length=7004857 Score = 140 bits (154), Expect = 9e-30 Identities = 318/472 (67%), Gaps = 21/472 (4%) Strand=Plus/Plus Query 2653 GCATCAAATACAATGGCTCAAGGAGGTGGCGGACCAATGGCAGACGATAACCAAGGCGCC 2712 ||||| | |||||||||| ||| | |||| | ||||||| ||| ||| || || || Sbjct 1720647 GCATCTAGTACAATGGCTGCAGGTGCTGGCAGCCCAATGGGCGACAATATGCAGGGTTCC 1720706 Query 2713 GAGGGAGTGGGTAATGCCTCGGGAGATTGGCATTGCGATACCCAATGGCTGGGCGACCAC 2772 || |||||||| | ||| |||| | |||||||||||| || ||| |||| || Sbjct 1720707 GATGGAGTGGGCGCTTCCTTGGGAAACTGGCATTGCGATTCCACGTGGGTGGGTGA--GA 1720764 Query 2773 GTCATTACAAAATCTACCAGAACTTGGGTTCTGCCCTCTTACGGGAATCATCTCTACTCG 2832 ||||| |||||||||||| | || ||||| ||||| | |||| || || || || | Sbjct 1720765 GTCATCACAAAATCTACCGGTACCTGGGTCCTGCCAACCTACGACAACCACCTGCACAAG 1720824 Query 2833 CCCATCAACTTTGATGGAACCACAGGGAAC--GGAACCCAAGCCGCTTACTGCGGATACG 2890 |||||| |||| | || || ||| || || || |||| |||| | Sbjct 1720825 GAAATCAACAACTCTGGAGCGACTGGAAACAATGACACCCAG-----TACTATGGATTC- 1720878 Query 2891 CTACCCCCTG--GGCCTACTTTGACTTTAACCGATTCCACTGCCACTTTTCCCCCCGAGA 2948 | | |||| | ||| | ||||| | || || ||| ||||||||||||| | ||| Sbjct 1720879 --AGCACCTGTAGAGATACCTGGACTTCCATCGGTTTCACGGCCACTTTTCCCCTCAAGA 1720936 Query 2949 CTGGCAAAGACTCATTAACAACCATACCGGAATACGACCAGTCGGACTCAAATTCAAGCT 3008 |||||| ||||| || ||| || || ||||| | || | || |||| Sbjct 1720937 TTGGCAACATCTCATCAATAAC--AACTGG----GGACCAAAAAGGCTTGACTT-TAGCT 1720989 Query 3009 GTTCAACATCCAGGTCAAGGAAATCACAGTACAAGATTCGACCAAAACGATCGCCAACAA 3068 ||| || | || ||| | ||| ||| ||| || || | || ||||| || || Sbjct 1720990 TTTCCACGTTCAAGTCTAAGAAGTCATGACACATGACAACACAATGACTATCGCTAATAA 1721049 Query 3069 TCTCACCAGCACCGTACAGGTCTTTGCGGACACGGAGCACCAGCTCCCGTAC 3120 |||||| ||||| | ||||| ||||||||| |||| | ||||| |||||| Sbjct 1721050 TCTCACAAGCACAATCCAGGTGTTTGCGGACTCGGACTATCAGCTACCGTAC 1721101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14574917663675