Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Equus_20asinus_20[refseq_20GCF_5F001305755.1_202015-10-02] 2,167 sequences; 2,391,051,217 total letters Query= NC_001701.1 Length=5106 Score E Sequences producing significant alignments: (Bits) Value seq1938 87.8 6e-14 >seq1938 Length=612750 Score = 87.8 bits (96), Expect = 6e-14 Identities = 100/131 (76%), Gaps = 5/131 (4%) Strand=Plus/Minus Query 1602 TATGGCTGTGTTAACTGGACTAATGAGAACTTTCCTTTTAATGATTGTGTTGATA--AAA 1659 ||||| |||| ||||||||| ||||| |||||||| || ||||| ||||||||| ||| Sbjct 325048 TATGGTTGTGCTAACTGGACCAATGAAAACTTTCCATTCAATGACAGTGTTGATAGGAAA 324989 Query 1660 TGCTGATTTGGTGGGAGGAGGGAAAAATGACTAAT-AAGGTTGTTGAATCTGCAAAAGCA 1718 | | |||||||||||| | |||||| | || || || ||||| || |||||||| Sbjct 324988 T--TAATTTGGTGGGAGAAACAAAAAATTTATGATAAAAGTGATTGAAACTACAAAAGCA 324931 Query 1719 ATTTTGGGAGG 1729 || ||||| Sbjct 324930 GTTCCAGGAGG 324920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16226815390005