Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Equus_20caballus_20[refseq_20GCF_5F000002305.2_202007-10-29] 9,637 sequences; 2,474,929,062 total letters Query= NC_001701.1 Length=5106 Score E Sequences producing significant alignments: (Bits) Value seq32 87.8 6e-14 >seq32 Length=124114077 Score = 87.8 bits (96), Expect = 6e-14 Identities = 100/131 (76%), Gaps = 5/131 (4%) Strand=Plus/Minus Query 1602 TATGGCTGTGTTAACTGGACTAATGAGAACTTTCCTTTTAATGATTGTGTTGATA--AAA 1659 ||||| |||| ||||||||| ||||| |||||||| || ||||| ||||||| | ||| Sbjct 77091160 TATGGTTGTGCTAACTGGACCAATGAAAACTTTCCGTTCAATGACAGTGTTGACAGGAAA 77091101 Query 1660 TGCTGATTTGGTGGGAGGAGGGAAAAATGACTAAT-AAGGTTGTTGAATCTGCAAAAGCA 1718 | | |||||||||||| | | |||||| | || || || ||||| || |||||||| Sbjct 77091100 T--TAATTTGGTGGGAGAAAGAAAAAATTCATGATAAAAGTGATTGAAACTACAAAAGCA 77091043 Query 1719 ATTTTGGGAGG 1729 || ||||| Sbjct 77091042 GTTCCAGGAGG 77091032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16225489577055