Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Equus_20przewalskii_20[refseq_20GCF_5F000696695.1_202014-06-05] 53,097 sequences; 2,395,954,271 total letters Query= NC_001701.1 Length=5106 Score E Sequences producing significant alignments: (Bits) Value seq491 87.8 6e-14 >seq491 Length=898725 Score = 87.8 bits (96), Expect = 6e-14 Identities = 100/131 (76%), Gaps = 5/131 (4%) Strand=Plus/Plus Query 1602 TATGGCTGTGTTAACTGGACTAATGAGAACTTTCCTTTTAATGATTGTGTTGATA--AAA 1659 ||||| |||| ||||||||| ||||| |||||||| || ||||| ||||||| | ||| Sbjct 777065 TATGGTTGTGCTAACTGGACCAATGAAAACTTTCCGTTCAATGACAGTGTTGACAGGAAA 777124 Query 1660 TGCTGATTTGGTGGGAGGAGGGAAAAATGACTAAT-AAGGTTGTTGAATCTGCAAAAGCA 1718 | | |||||||||||| | | |||||| | || || || ||||| || |||||||| Sbjct 777125 T--TAATTTGGTGGGAGAAAGAAAAAATTCATGATAAAAGTGATTGAAACTACAAAAGCA 777182 Query 1719 ATTTTGGGAGG 1729 || ||||| Sbjct 777183 GTTCCAGGAGG 777193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16217776078955