Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eschrichtius_20robustus_20[genbank_20GCA_5F002189225.1_202017-06-09] 57,203 sequences; 2,849,453,582 total letters Query= NC_022104.1 Length=5403 Score E Sequences producing significant alignments: (Bits) Value seq49 80.6 9e-12 >seq49 Length=1158978 Score = 80.6 bits (88), Expect = 9e-12 Identities = 103/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 1372 TTATGGCTGCGTGAATTGGACCAATCAGAACTTTCCATTCAATGACTGTCACTGCCAGTC 1431 ||||||||| | || ||||| ||| |||||||||| ||||||||||| || Sbjct 531234 TTATGGCTGTGGAAACTGGACTAATGAGAACTTTCCTTTCAATGACTGGGTAGATAAGAT 531293 Query 1432 GCTGGTGTGGTGGGAGGAAGGGAGGATGACTGAAAATATTGTGGAGGTGGCAAAAGCAAT 1491 | || | |||||||||||||| | ||||||| || ||||| ||| || ||||| || Sbjct 531294 GGTGATTTGGTGGGAGGAAGGAAAGATGACTAGTAAAATTGTAGAGTCTGCTAAAGCCAT 531353 Query 1492 CTTAGGTGGAGCGCCTGTACGG 1513 || ||||| | |||| ||| Sbjct 531354 TTTGGGTGGGTTGGCTGTGCGG 531375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17166852700360