Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Giraffa_20camelopardalis_20tippelskirchi_20[genbank_20GCA_5F00165123 5.1_202016-05-20] 513,177 sequences; 2,705,072,464 total letters Query= NC_000883.2 Length=5596 Score E Sequences producing significant alignments: (Bits) Value seq56239 104 8e-19 >seq56239 Length=1187 Score = 104 bits (114), Expect = 8e-19 Identities = 110/145 (76%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 1558 GATAAAAAATGTGGCAAGAAAAATACACTGTGGTTTTATGGGCCGCCAAGTACAGGAAAA 1617 |||||||||| || |||| |||||| ||||||||| || || || || ||||| || Sbjct 800 GATAAAAAATTAGGGAAGAGAAATACTTTGTGGTTTTGGGGTCCCCCCAGCACAGGGAAG 741 Query 1618 ACAAACTTGGCAATGGCCATTGCTAAAAGTGTTCCAGTATATGGCATGGTTAACTGGAAT 1677 || || |||||| |||| |||||| | |||| | |||||||||||| |||| | Sbjct 740 ACTAATTTGGCATTGGCAATTGCTCGCACACTTCCTAGGTTTGGCATGGTTAATTGGACT 681 Query 1678 AATGAAAACTTTCCATTTAATGATG 1702 || ||||| || || |||||||||| Sbjct 680 AACGAAAATTTCCCCTTTAATGATG 656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17695317794605