Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Giraffa_20camelopardalis_20tippelskirchi_20[genbank_20GCA_5F00165123 5.1_202016-05-20] 513,177 sequences; 2,705,072,464 total letters Query= NC_004295.1 Length=5028 Score E Sequences producing significant alignments: (Bits) Value seq56239 102 3e-18 >seq56239 Length=1187 Score = 102 bits (112), Expect = 3e-18 Identities = 190/279 (68%), Gaps = 0/279 (0%) Strand=Plus/Minus Query 1222 CAAAACTATGATCCTCTTTTAGTGGGTCAACATGTGTTAAGGTGGATTGACAAAAAATGT 1281 ||||| |||| || | | | | ||||||| || ||| ||| || ||||||| Sbjct 848 CAAAATCATGACCCAGTGTCATTTGGTCAACTGGTATTAGCCTGGGCAGATAAAAAATTA 789 Query 1282 GGTaaaaaaaaCACCCTGTGGTTTTACGGGCCACCAAGTACTGGAAAAACAAATTTGGCA 1341 || || | ||| || ||||||||| || || || || || || || || ||||||||| Sbjct 788 GGGAAGAGAAATACTTTGTGGTTTTGGGGTCCCCCCAGCACAGGGAAGACTAATTTGGCA 729 Query 1342 ATGGCTATTGCTAAAACTGTACCAGTGTATGGAATGGTGAATTGGAATAATGAAAACTTT 1401 |||| |||||| || | || || ||| ||||| ||||||| ||| ||||| || Sbjct 728 TTGGCAATTGCTCGCACACTTCCTAGGTTTGGCATGGTTAATTGGACTAACGAAAATTTC 669 Query 1402 CCATTTAATGATGTAGCGGGGAAAAGTTTGGTGGTCTGGGATGAAGGCATTATTAAGTCC 1461 || |||||||||| | | ||| || | | | ||||| || || || | ||| Sbjct 668 CCCTTTAATGATGCACCCCATAAATGTGTTTTAATATGGGACGAGGGACGCATAACTTCC 609 Query 1462 ACTATTGTGGAAGCTGCAAAAGCCATTTTAGGTGGTCAG 1500 | || ||||||||||| || ||||| || || ||| Sbjct 608 AAGATAGTGGAAGCTGCCAAGAGTATTTTGGGGGGCCAG 570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15887919753365