Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptonychotes_20weddellii_20[refseq_20GCF_5F000349705.1_202013-03-
29] 16,711 sequences; 3,156,902,762 total letters
Query= NC_001701.1
Length=5106
Score E
Sequences producing significant alignments: (Bits) Value
seq28 86.0 2e-13
seq2170 82.4 2e-12
>seq28
Length=4555648
Score = 86.0 bits (94), Expect = 2e-13
Identities = 98/129 (76%), Gaps = 2/129 (2%)
Strand=Plus/Minus
Query 1602 TATGGCTGTGTTAACTGGACTAATGAGAACTTTCCTTTTAATGATTGTGTTGATAAAATG 1661
||||| |||||||| ||||| ||||| |||||||| || || ||| ||||| | ||||
Sbjct 2752384 TATGGATGTGTTAATTGGACAAATGAAAACTTTCCATTCAAGGATGGTGTTCACAAAAAA 2752325
Query 1662 CTGATTTGGTGGGAGGAGGGAAAAATGACTAATAAGGTTG-TTGAATCTGCAAAAGCAAT 1720
|| |||||| | || | |||||||| | | |||| || || || ||||||||||| |
Sbjct 2752324 TTGGTTTGGTTGAAGAAAGGAAAAATCA-TGATAAAAATGATTAAAACTGCAAAAGCAGT 2752266
Query 1721 TTTGGGAGG 1729
| | | |||
Sbjct 2752265 TCTAGAAGG 2752257
>seq2170
Length=432677
Score = 82.4 bits (90), Expect = 2e-12
Identities = 95/127 (75%), Gaps = 1/127 (1%)
Strand=Plus/Plus
Query 1604 TGGCTGTGTTAACTGGACTAATGAGAACTTTCCTTTTAATGATTGTGTTGATAAAATGCT 1663
||| |||||||| || || | ||| || |||||||||||||||||| | || | || ||
Sbjct 263854 TGGTTGTGTTAAATGAACCAGTGAAAATTTTCCTTTTAATGATTGTATGGACAGAAAACT 263913
Query 1664 GATTTGGTGGGAGGAGGGAAAAATGACT-AATAAGGTTGTTGAATCTGCAAAAGCAATTT 1722
||||||||| | ||| ||||| | ||| || || || ||| | || ||||| |||
Sbjct 263914 CATTTGGTGGAAAGAGAGAAAATTAACTGAAAAAAACAGTAGAAACAGCTAAAGCTATTA 263973
Query 1723 TGGGAGG 1729
|||| ||
Sbjct 263974 TGGGTGG 263980
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 16224234048165
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |