Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptonychotes_20weddellii_20[refseq_20GCF_5F000349705.1_202013-03- 29] 16,711 sequences; 3,156,902,762 total letters Query= NC_028045.1 Length=1767 Score E Sequences producing significant alignments: (Bits) Value seq10 78.8 1e-11 seq89 77.0 4e-11 >seq10 Length=6386410 Score = 78.8 bits (86), Expect = 1e-11 Identities = 55/63 (87%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 986 CAGATACTACACTTGATCTTAGCCAAAAGGCCGAGGAGTGATCTAAACCACCTTTTCAAA 1045 ||||||||||||||||||||||||||||||||||| || |||| ||| || | ||| ||| Sbjct 2559143 CAGATACTACACTTGATCTTAGCCAAAAGGCCGAGAAGCGATCCAAAACAACATTTTAAA 2559202 Query 1046 TTA 1048 || Sbjct 2559203 GTA 2559205 >seq89 Length=3378547 Score = 77.0 bits (84), Expect = 4e-11 Identities = 50/55 (91%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 986 CAGATACTACACTTGATCTTAGCCAAAAGGCCGAGGAGTGATCTAAACCACCTTT 1040 ||||||||||||||||||||||||||||||||||| || ||||||| | || ||| Sbjct 846100 CAGATACTACACTTGATCTTAGCCAAAAGGCCGAGAAGCGATCTAAGCAACTTTT 846046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5544615354458