Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_001701.1
Length=5106
Score E
Sequences producing significant alignments: (Bits) Value
seq14187 313 8e-82
>seq14187
Length=3355950
Score = 313 bits (346), Expect = 8e-82
Identities = 395/539 (73%), Gaps = 3/539 (1%)
Strand=Plus/Plus
Query 1334 AGCTGCACTGGAAAATGCCCGTGCTGAAATGTTATTGACAAAGACTGCAACTGATTACCT 1393
||| |||||||| || | || ||||||||| |||| ||| | || | |||||
Sbjct 1819545 AGCAGCACTGGAGAACGTGCGAGCTGAAATGCCCCTGACGAAGTCGGCCGAAGGCTACCT 1819604
Query 1394 GATAGGAAAAGACCCTGTCCTGGATATAACTAAGAATAGGGTCTATCAAATTCTGAAAAT 1453
| |||| || || ||| ||| || || | ||| | ||| | |||| || | | |
Sbjct 1819605 GCTAGGCAAGCTTCCAGTCGGGGACATCACAAGGAACAAGGTGTTTCAACTTTTCCAGGT 1819664
Query 1454 GAATAACTACAACCCTCAATACATAGGAAGTATCCT-GTGCGGCTGGGTGAAGAGAGAGT 1512
|||| ||| |||| | || || ||||| || || ||||| | | ||||
Sbjct 1819665 GAATCGGTACGACCCCGTCTTGGCAGCAAACATCCTAGTTCG-CTGGGCCCGGCGGGAGT 1819723
Query 1513 TCAACAAAAGAAACGCCATATGGCTCTACGGACCTGCCACCACCGGGAAGACCAACATTG 1572
||||||| | |||||||| ||| ||||| ||||||| |||||| | ||||| | ||| |
Sbjct 1819724 TCAACAAGTGCAACGCCATCTGGTTCTACAGACCTGCGACCACCAGCAAGACAAGCATCG 1819783
Query 1573 CAGAAGCTATTGCCCATGCTGTACCCTTCTATGGCTGTGTTAACTGGACTAATGAGAACT 1632
|| |||||||||| ||||| || || |||||||||| |||||||||||||||||||
Sbjct 1819784 TGGAGGCTATTGCCCGTGCTGGGCCATTTTATGGCTGTGGAAACTGGACTAATGAGAACT 1819843
Query 1633 TTCCTTTTAATGATTGTGTTGATAAAATGCTGATTTGGTGGGAGGAGGGAAAAATGACTA 1692
||||||| ||||| || || ||||| ||| |||||||||||||||| ||||| ||||| |
Sbjct 1819844 TTCCTTTCAATGACTGGGTAGATAAGATGGTGATTTGGTGGGAGGAAGGAAAGATGACCA 1819903
Query 1693 ATAAGGTTGTTGAATCTGCAAAAGCAATTTTGGGAGGGTCTGCTGT-CCGGGTAGACCAG 1751
|| |||| | ||||| ||||| |||||||| ||||| ||||| | |||| || ||
Sbjct 1819904 GGAAAATTGTAGTGTCTGCTAAAGCCATTTTGGGTGGGTCGGCTGTGCGGGGTTGATCAA 1819963
Query 1752 AAATGTAAAGGATCTGTTTGTATTGAACCTACTCCTGTAATTATTACTAGTAATACTGAT 1811
||||||||||| ||||| |||||||| | |||||| ||||||| ||||||| ||
Sbjct 1819964 AAATGTAAAGGTTCTGTGCAAATTGAACCAATGCCTGTACTTATTACCAGTAATATATAT 1820023
Query 1812 ATGTGTATGATTGTTGATGGCAACTCTACTACAATGGAACATAGAATACCATTAGAGGA 1870
| ||||| |||||||| ||| ||||| ||||||||| ||| || |||||
Sbjct 1820024 AAGTGTACTGGGGTTGATGGGAACAGCACTACCCTGGAACATAAGGAACCTTTGGAGGA 1820082
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 16221748903195
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |