Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_001829.1
Length=4767
Score E
Sequences producing significant alignments: (Bits) Value
seq14187 129 2e-26
>seq14187
Length=3355950
Score = 129 bits (142), Expect = 2e-26
Identities = 137/181 (76%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 1339 AGTTCGGGAAGAGGAACACCATCTGGCTCTTTGGGCCGGCCACGACGGGTAAAACCAACA 1398
||||| ||| | ||| |||||||| ||| | || || || || | || || | ||
Sbjct 1819721 AGTTCAACAAGTGCAACGCCATCTGGTTCTACAGACCTGCGACCACCAGCAAGACAAGCA 1819780
Query 1399 TCGCGGAAGCCATCGCCCACGCCGTGCCCTTCTACGGCTGCGTGAACTGGACCAATGAGA 1458
||| ||| || || |||| || | ||| || || ||||| | |||||||| |||||||
Sbjct 1819781 TCGTGGAGGCTATTGCCCGTGCTGGGCCATTTTATGGCTGTGGAAACTGGACTAATGAGA 1819840
Query 1459 ACTTTCCGTTCAACGATTGCGTCGACAAGATGGTGATCTGGTGGGAGGAGGGCAAGATGA 1518
||||||| ||||| || || || || ||||||||||| ||||||||||| || |||||||
Sbjct 1819841 ACTTTCCTTTCAATGACTGGGTAGATAAGATGGTGATTTGGTGGGAGGAAGGAAAGATGA 1819900
Query 1519 C 1519
|
Sbjct 1819901 C 1819901
Score = 127 bits (140), Expect = 6e-26
Identities = 279/410 (68%), Gaps = 26/410 (6%)
Strand=Plus/Plus
Query 2970 CACCAGAACCTGGGTCTTGCCCACCTACAACAACCACCTCTACAAGC-GACTCGGAGAGA 3028
||| ||||| ||||| || ||| ||| ||||| | |||||||||| || | | ||
Sbjct 1821449 CACGAGAACTTGGGTGTTCCCCTTCTATGACAACAATCTCTACAAGCAGATT---AAAGG 1821505
Query 3029 GCCTGCAGTCCAACA------CCTACAACGGATTCTCCACCCCCTGGGGATACTTTGACT 3082
| || ||||||| ||||| || | | |||||| |||| ||| | ||||
Sbjct 1821506 CCACGCC-TCCAACATGTCCGCCTACTTGGGTTACAGCACCCC-TGGGCCTACCTCGACT 1821563
Query 3083 TCAACCGCTTCCACTGCCACTTCTCACCACGTGACTGGCAGCGACTCATCAACAACAACT 3142
||||| | |||| ||||||| || | ||||| ||||| |||||||||||| |||
Sbjct 1821564 TCAACGGACTCCAGTGCCACTGGAGTCCCTGAGACTGTCAGCGGCTCATCAACAACTACT 1821623
Query 3143 GGGGCATGCGACCCAAAGCCATGCGGGTCAAAATCTTCAACATCCAGGTCAAGGAGGTCA 3202
||||||| | ||| || || | ||||||| |||||||| || || ||||||||||
Sbjct 1821624 GGGGCATCCAACCAAAGGCTCACAGAATCAAAATTTTCAACATACAAGTTAAGGAGGTCA 1821683
Query 3203 CGACGTCGAACGGC---GAGACAACGGTGGCTAATAACCTTACCAGCACGGTTCAGATCT 3259
| | | ||| |||||| | || |||||||| || || | ||||| |
Sbjct 1821684 TGGAGGCAGCAGGCACAAAGACAA---TTGCCAATAACCTAACATCAACCATCCAGATTT 1821740
Query 3260 TTGCGGACTCGTCGTACGAACTGCCGTACGTGATGG---ATGCGGGTCA-AGAGGGCAGC 3315
|||| || | ||| | ||||| || ||| | | |||| || ||||| ||
Sbjct 1821741 TTGCAGATGACACATACCAGCTGCCATATGTGGTTGGAAATGC----CACCGAGGGGTGC 1821796
Query 3316 CTGCCTCCTTTTCCCAACGACGTCTTTATGGTGCCCCAGTACGGCTACTG 3365
||||| |||||||| || || |||||| |||| |||||| | |||||
Sbjct 1821797 TTGCCTGCTTTTCCCGGTGATGTTTTTATGTTGCCTCAGTACTGGTACTG 1821846
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15137313312940
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |