Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_014468.1
Length=4286
Score E
Sequences producing significant alignments: (Bits) Value
seq14187 174 4e-40
>seq14187
Length=3355950
Score = 174 bits (192), Expect = 4e-40
Identities = 238/322 (74%), Gaps = 9/322 (3%)
Strand=Plus/Plus
Query 2836 TACTTTGGTTACAGCACGCCTTGGGGATACTTCGATTTCAATCGATTCCACTGCCACTTT 2895
||||| ||||||||||| ||| ||| ||| |||| ||||| || |||| |||||||
Sbjct 1821528 TACTTGGGTTACAGCACCCCT-GGGCCTACCTCGACTTCAACGGACTCCAGTGCCACTGG 1821586
Query 2896 TCTCCCAGGGACTGGCAGCGGCTCATCAACAACCACTGGGGCATCCGCCCCAAGCGGCTC 2955
|||| | ||||| |||||||||||||||||| |||||||||||| || || |||||
Sbjct 1821587 AGTCCCTGAGACTGTCAGCGGCTCATCAACAACTACTGGGGCATCCAACCAAA--GGCTC 1821644
Query 2956 -CA-CTTTAAGCTCTTCAACATCCAGGTCAAGGAGGTCACGACGACCGACGGCACCACGA 3013
|| | || | |||||||| || || |||||||||| | | | | ||||| | ||
Sbjct 1821645 ACAGAATCAAAATTTTCAACATACAAGTTAAGGAGGTCATGGAGGCAGCAGGCACAAAGA 1821704
Query 3014 CCATCGCCAACAACCTCACCAGCACCATACAGGTCTTTGCGGA-CACGGAGTACCAGCTC 3072
| || ||||| ||||| || ||||| ||| | ||||| || || | ||||||||
Sbjct 1821705 CAATTGCCAATAACCTAACATCAACCATCCAGATTTTTGCAGATGACACA-TACCAGCTG 1821763
Query 3073 CCGTACGTGCTCGGCAACGCCCACGAGGGCTGCCTGCC-GCCGTTCCCGGCGGACGTCTT 3131
|| || ||| | || || ||| |||||| ||| |||| || ||||||| || || ||
Sbjct 1821764 CCATATGTGGTTGGAAATGCCACCGAGGGGTGCTTGCCTGCTTTTCCCGG-TGATGTTTT 1821822
Query 3132 CATGCTGCCGCAGTACGCGTAC 3153
||| |||| |||||| ||||
Sbjct 1821823 TATGTTGCCTCAGTACTGGTAC 1821844
Score = 116 bits (128), Expect = 1e-22
Identities = 130/174 (75%), Gaps = 0/174 (0%)
Strand=Plus/Plus
Query 1153 CAAGCGCAACACCGTCTGGCTCTTCGGGCCGGCCACGACCGGCAAGACGAACCTCGCCGA 1212
|||| ||||| || ||||| ||| | | || || || ||| ||||||| | | ||| ||
Sbjct 1819728 CAAGTGCAACGCCATCTGGTTCTACAGACCTGCGACCACCAGCAAGACAAGCATCGTGGA 1819787
Query 1213 GGCCATCAGCCACTCGGTGCCCTTCTACGGCTGCGTCAACTGGACCAACGAGAACTTCCC 1272
||| || || | | ||| || || ||||| | |||||||| || |||||||| ||
Sbjct 1819788 GGCTATTGCCCGTGCTGGGCCATTTTATGGCTGTGGAAACTGGACTAATGAGAACTTTCC 1819847
Query 1273 CTTCAACGACTGCGTGGACAAGATGATCATCTGGTGGGAGGAGGGCAAGATGAC 1326
||||| ||||| || || |||||| | || ||||||||||| || ||||||||
Sbjct 1819848 TTTCAATGACTGGGTAGATAAGATGGTGATTTGGTGGGAGGAAGGAAAGATGAC 1819901
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 13598630366295
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |